Analysis of Ligand-Protein Contacts in PDB entry:
4PD4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 4PD4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
UMQ
A
501 34UNDECYL-MALTOSIDE
lig 2
3PH
A
502 311,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 3
HEM
C
4001 43PROTOPORPHYRIN IX CONTAINING FE
lig 4
HEM
C
4002 43PROTOPORPHYRIN IX CONTAINING FE
lig 5
AOQ
C
4003 26 HYDROXYNAPHTHALENE-1,4-DIONE
lig 6
3PE
C
4004 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 7
UQ6
C
4005 43 22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZE
lig 8
3PH
C
4006 351,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 9
HEM
D
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 10
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 11
3PH
E
302 381,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE