Analysis of Ligand-Protein Contacts in PDB entry:
4PTN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 4PTN. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
EDO
A
401 41,2-ETHANEDIOL
lig 2
EDO
A
402 41,2-ETHANEDIOL
lig 3
GXV
A
403 6L-GLYCERALDEHYDE
lig 4
MG
A
404 1MAGNESIUM ION
lig 5
EDO
B
401 41,2-ETHANEDIOL
lig 6
EDO
B
402 41,2-ETHANEDIOL
lig 7
EDO
B
403 41,2-ETHANEDIOL
lig 8
EDO
B
404 41,2-ETHANEDIOL
lig 9
GOL
B
405 6GLYCEROL
lig 10
GXV
B
406 6L-GLYCERALDEHYDE
lig 11
MG
B
407 1MAGNESIUM ION
lig 12
PYR
B
408 6PYRUVIC ACID
lig 13
EDO
C
401 41,2-ETHANEDIOL
lig 14
EDO
C
402 41,2-ETHANEDIOL
lig 15
EDO
C
403 41,2-ETHANEDIOL
lig 16
GXV
C
404 6L-GLYCERALDEHYDE
lig 17
MG
C
405 1MAGNESIUM ION
lig 18
EDO
D
401 41,2-ETHANEDIOL
lig 19
EDO
D
402 41,2-ETHANEDIOL
lig 20
GXV
D
403 6L-GLYCERALDEHYDE
lig 21
MG
D
404 1MAGNESIUM ION
lig 22
PYR
D
405 6PYRUVIC ACID