Analysis of Ligand-Protein Contacts in PDB entry:
4R09


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 46 ligands in PDB entry 4R09. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 13
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 20
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 22
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 25
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 30
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
URI
A
901 17URIDINE
lig 33
06S
A
902 48 PHOSPHOROTHIOATE
lig 34
UPT
A
903 20 YL]PYRIMIDINE-2,4(1H,3H)-DIONE
lig 35
NAG
A
913 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
URI
B
901 17URIDINE
lig 37
06S
B
902 48 PHOSPHOROTHIOATE
lig 38
UPT
B
903 20 YL]PYRIMIDINE-2,4(1H,3H)-DIONE
lig 39
NAG
B
911 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
06S
C
901 48 PHOSPHOROTHIOATE
lig 41
UPT
C
902 20 YL]PYRIMIDINE-2,4(1H,3H)-DIONE
lig 42
URI
D
901 17URIDINE
lig 43
URI
D
902 17URIDINE
lig 44
06S
D
903 48 PHOSPHOROTHIOATE
lig 45
UPT
D
904 20 YL]PYRIMIDINE-2,4(1H,3H)-DIONE
lig 46
NAG
D
908 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE