Analysis of Ligand-Protein Contacts in PDB entry:
4RFB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 4RFB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 3
SIA
E
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 4
FUC
E
4 10ALPHA-L-FUCOPYRANOSE
lig 5
NAG
F
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
F
2 11BETA-D-GALACTOPYRANOSE
lig 7
SIA
F
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 8
FUC
F
4 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
G
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
GAL
G
2 11BETA-D-GALACTOPYRANOSE
lig 11
SIA
G
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 12
FUC
G
4 10ALPHA-L-FUCOPYRANOSE
lig 13
NAG
H
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
GAL
H
2 11BETA-D-GALACTOPYRANOSE
lig 15
SIA
H
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 16
FUC
H
4 10ALPHA-L-FUCOPYRANOSE
lig 17
CL
A
305 1CHLORIDE ION
lig 18
CL
A
306 1CHLORIDE ION
lig 19
PEG
A
307 7DI(HYDROXYETHYL)ETHER
lig 20
CL
B
305 1CHLORIDE ION
lig 21
CL
B
306 1CHLORIDE ION
lig 22
PGE
B
307 10TRIETHYLENE GLYCOL
lig 23
CL
C
305 1CHLORIDE ION
lig 24
PEG
C
306 7DI(HYDROXYETHYL)ETHER
lig 25
PEG
C
307 7DI(HYDROXYETHYL)ETHER
lig 26
CL
D
305 1CHLORIDE ION
lig 27
EDO
D
306 41,2-ETHANEDIOL