Analysis of Ligand-Protein Contacts in PDB entry:
4RJK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 63 ligands in PDB entry 4RJK. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPP
A
601 26THIAMINE DIPHOSPHATE
lig 2
MG
A
602 1MAGNESIUM ION
lig 3
PG4
A
603 10TETRAETHYLENE GLYCOL
lig 4
PG4
A
604 13TETRAETHYLENE GLYCOL
lig 5
PG4
A
605 10TETRAETHYLENE GLYCOL
lig 6
PG4
A
606 10TETRAETHYLENE GLYCOL
lig 7
PG4
A
607 13TETRAETHYLENE GLYCOL
lig 8
PG4
A
608 10TETRAETHYLENE GLYCOL
lig 9
TPP
B
601 26THIAMINE DIPHOSPHATE
lig 10
MG
B
602 1MAGNESIUM ION
lig 11
PG4
B
603 10TETRAETHYLENE GLYCOL
lig 12
PG4
B
604 10TETRAETHYLENE GLYCOL
lig 13
PG4
B
605 10TETRAETHYLENE GLYCOL
lig 14
PG4
B
606 13TETRAETHYLENE GLYCOL
lig 15
PG4
B
607 13TETRAETHYLENE GLYCOL
lig 16
TPP
C
601 26THIAMINE DIPHOSPHATE
lig 17
MG
C
602 1MAGNESIUM ION
lig 18
PG4
C
603 13TETRAETHYLENE GLYCOL
lig 19
PG4
C
604 13TETRAETHYLENE GLYCOL
lig 20
PG4
C
605 10TETRAETHYLENE GLYCOL
lig 21
PG4
C
606 10TETRAETHYLENE GLYCOL
lig 22
PG4
C
607 7TETRAETHYLENE GLYCOL
lig 23
TPP
D
601 26THIAMINE DIPHOSPHATE
lig 24
MG
D
602 1MAGNESIUM ION
lig 25
PG4
D
603 13TETRAETHYLENE GLYCOL
lig 26
PG4
D
604 11TETRAETHYLENE GLYCOL
lig 27
PG4
D
605 13TETRAETHYLENE GLYCOL
lig 28
PG4
D
606 10TETRAETHYLENE GLYCOL
lig 29
PG4
D
607 10TETRAETHYLENE GLYCOL
lig 30
PG4
D
608 7TETRAETHYLENE GLYCOL
lig 31
PG4
D
609 7TETRAETHYLENE GLYCOL
lig 32
TPP
E
601 26THIAMINE DIPHOSPHATE
lig 33
MG
E
602 1MAGNESIUM ION
lig 34
PG4
E
603 10TETRAETHYLENE GLYCOL
lig 35
PG4
E
604 13TETRAETHYLENE GLYCOL
lig 36
PG4
E
605 8TETRAETHYLENE GLYCOL
lig 37
PG4
E
606 13TETRAETHYLENE GLYCOL
lig 38
PG4
E
607 8TETRAETHYLENE GLYCOL
lig 39
PG4
E
608 10TETRAETHYLENE GLYCOL
lig 40
PG4
E
609 10TETRAETHYLENE GLYCOL
lig 41
TPP
F
601 26THIAMINE DIPHOSPHATE
lig 42
MG
F
602 1MAGNESIUM ION
lig 43
PG4
F
603 13TETRAETHYLENE GLYCOL
lig 44
PG4
F
604 7TETRAETHYLENE GLYCOL
lig 45
PG4
F
605 10TETRAETHYLENE GLYCOL
lig 46
PG4
F
606 10TETRAETHYLENE GLYCOL
lig 47
PG4
F
607 10TETRAETHYLENE GLYCOL
lig 48
PG4
F
608 13TETRAETHYLENE GLYCOL
lig 49
PYR
F
609 6PYRUVIC ACID
lig 50
PYR
F
610 6PYRUVIC ACID
lig 51
TPP
G
601 26THIAMINE DIPHOSPHATE
lig 52
MG
G
602 1MAGNESIUM ION
lig 53
PG4
G
603 10TETRAETHYLENE GLYCOL
lig 54
PG4
G
604 13TETRAETHYLENE GLYCOL
lig 55
PG4
G
605 11TETRAETHYLENE GLYCOL
lig 56
PG4
G
606 8TETRAETHYLENE GLYCOL
lig 57
PYR
G
607 6PYRUVIC ACID
lig 58
PYR
G
608 6PYRUVIC ACID
lig 59
TDL
H
601 32 PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZO
lig 60
MG
H
602 1MAGNESIUM ION
lig 61
PG4
H
603 13TETRAETHYLENE GLYCOL
lig 62
PG4
H
604 13TETRAETHYLENE GLYCOL
lig 63
PYR
H
605 6PYRUVIC ACID