Analysis of Ligand-Protein Contacts in PDB entry:
4RKM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 161 ligands in PDB entry 4RKM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CU1
A
801 1COPPER (I) ION
lig 2
SX
A
802 2SULFUR OXIDE
lig 3
BU3
A
803 6(R,R)-2,3-BUTANEDIOL
lig 4
BU3
A
804 6(R,R)-2,3-BUTANEDIOL
lig 5
ACT
A
805 4ACETATE ION
lig 6
HEM
A
806 43PROTOPORPHYRIN IX CONTAINING FE
lig 7
HEM
A
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 8
HEM
A
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 9
HEM
A
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 10
HEM
A
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 11
HEM
A
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 12
HEM
A
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 13
HEM
A
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 14
SO2
A
814 3SULFUR DIOXIDE
lig 15
CU1
B
801 1COPPER (I) ION
lig 16
SX
B
802 2SULFUR OXIDE
lig 17
BU3
B
803 6(R,R)-2,3-BUTANEDIOL
lig 18
BU3
B
804 6(R,R)-2,3-BUTANEDIOL
lig 19
BU3
B
805 6(R,R)-2,3-BUTANEDIOL
lig 20
ACT
B
806 4ACETATE ION
lig 21
HEM
B
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 22
HEM
B
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 23
HEM
B
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 24
HEM
B
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 25
HEM
B
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 26
HEM
B
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 27
HEM
B
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 28
HEM
B
814 43PROTOPORPHYRIN IX CONTAINING FE
lig 29
CU1
C
801 1COPPER (I) ION
lig 30
SX
C
802 2SULFUR OXIDE
lig 31
BU3
C
803 6(R,R)-2,3-BUTANEDIOL
lig 32
BU3
C
804 6(R,R)-2,3-BUTANEDIOL
lig 33
ACT
C
805 4ACETATE ION
lig 34
HEM
C
806 43PROTOPORPHYRIN IX CONTAINING FE
lig 35
HEM
C
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 36
HEM
C
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 37
HEM
C
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 38
HEM
C
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 39
HEM
C
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 40
HEM
C
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 41
HEM
C
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 42
CU1
D
801 1COPPER (I) ION
lig 43
SO2
D
802 3SULFUR DIOXIDE
lig 44
BU3
D
803 6(R,R)-2,3-BUTANEDIOL
lig 45
BU3
D
804 6(R,R)-2,3-BUTANEDIOL
lig 46
ACT
D
805 4ACETATE ION
lig 47
HEM
D
806 43PROTOPORPHYRIN IX CONTAINING FE
lig 48
HEM
D
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 49
HEM
D
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 50
HEM
D
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 51
HEM
D
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 52
HEM
D
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 53
HEM
D
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 54
HEM
D
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 55
CU1
E
801 1COPPER (I) ION
lig 56
SX
E
802 2SULFUR OXIDE
lig 57
BU3
E
803 6(R,R)-2,3-BUTANEDIOL
lig 58
BU3
E
804 6(R,R)-2,3-BUTANEDIOL
lig 59
ACT
E
805 4ACETATE ION
lig 60
HEM
E
806 43PROTOPORPHYRIN IX CONTAINING FE
lig 61
HEM
E
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 62
HEM
E
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 63
HEM
E
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 64
HEM
E
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 65
HEM
E
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 66
HEM
E
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 67
HEM
E
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 68
CU1
F
801 1COPPER (I) ION
lig 69
SX
F
802 2SULFUR OXIDE
lig 70
BU3
F
803 6(R,R)-2,3-BUTANEDIOL
lig 71
BU3
F
804 6(R,R)-2,3-BUTANEDIOL
lig 72
BU3
F
805 6(R,R)-2,3-BUTANEDIOL
lig 73
ACT
F
806 4ACETATE ION
lig 74
HEM
F
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 75
HEM
F
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 76
HEM
F
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 77
HEM
F
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 78
HEM
F
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 79
HEM
F
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 80
HEM
F
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 81
HEM
F
814 43PROTOPORPHYRIN IX CONTAINING FE
lig 82
CU1
H
801 1COPPER (I) ION
lig 83
SX
H
802 2SULFUR OXIDE
lig 84
BU3
H
803 6(R,R)-2,3-BUTANEDIOL
lig 85
BU3
H
804 6(R,R)-2,3-BUTANEDIOL
lig 86
BU3
H
805 6(R,R)-2,3-BUTANEDIOL
lig 87
ACT
H
806 4ACETATE ION
lig 88
HEM
H
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 89
HEM
H
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 90
HEM
H
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 91
HEM
H
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 92
HEM
H
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 93
HEM
H
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 94
HEM
H
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 95
HEM
H
814 43PROTOPORPHYRIN IX CONTAINING FE
lig 96
CU1
I
801 1COPPER (I) ION
lig 97
SO2
I
802 3SULFUR DIOXIDE
lig 98
BU3
I
803 6(R,R)-2,3-BUTANEDIOL
lig 99
BU3
I
804 6(R,R)-2,3-BUTANEDIOL
lig 100
ACT
I
805 4ACETATE ION
lig 101
HEM
I
806 43PROTOPORPHYRIN IX CONTAINING FE
lig 102
HEM
I
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 103
HEM
I
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 104
HEM
I
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 105
HEM
I
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 106
HEM
I
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 107
HEM
I
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 108
HEM
I
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 109
CU1
J
801 1COPPER (I) ION
lig 110
SX
J
802 2SULFUR OXIDE
lig 111
BU3
J
803 6(R,R)-2,3-BUTANEDIOL
lig 112
BU3
J
804 6(R,R)-2,3-BUTANEDIOL
lig 113
ACT
J
805 4ACETATE ION
lig 114
HEM
J
806 43PROTOPORPHYRIN IX CONTAINING FE
lig 115
HEM
J
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 116
HEM
J
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 117
HEM
J
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 118
HEM
J
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 119
HEM
J
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 120
HEM
J
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 121
HEM
J
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 122
CU1
K
801 1COPPER (I) ION
lig 123
SX
K
802 2SULFUR OXIDE
lig 124
BU3
K
803 6(R,R)-2,3-BUTANEDIOL
lig 125
BU3
K
804 6(R,R)-2,3-BUTANEDIOL
lig 126
ACT
K
805 4ACETATE ION
lig 127
HEM
K
806 43PROTOPORPHYRIN IX CONTAINING FE
lig 128
HEM
K
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 129
HEM
K
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 130
HEM
K
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 131
HEM
K
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 132
HEM
K
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 133
HEM
K
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 134
HEM
K
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 135
CU1
L
801 1COPPER (I) ION
lig 136
SX
L
802 2SULFUR OXIDE
lig 137
BU3
L
803 6(R,R)-2,3-BUTANEDIOL
lig 138
BU3
L
804 6(R,R)-2,3-BUTANEDIOL
lig 139
ACT
L
805 4ACETATE ION
lig 140
HEM
L
806 43PROTOPORPHYRIN IX CONTAINING FE
lig 141
HEM
L
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 142
HEM
L
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 143
HEM
L
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 144
HEM
L
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 145
HEM
L
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 146
HEM
L
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 147
HEM
L
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 148
CU1
G
801 1COPPER (I) ION
lig 149
SX
G
802 2SULFUR OXIDE
lig 150
BU3
G
803 6(R,R)-2,3-BUTANEDIOL
lig 151
BU3
G
804 6(R,R)-2,3-BUTANEDIOL
lig 152
ACT
G
805 4ACETATE ION
lig 153
HEM
G
806 43PROTOPORPHYRIN IX CONTAINING FE
lig 154
HEM
G
807 43PROTOPORPHYRIN IX CONTAINING FE
lig 155
HEM
G
808 43PROTOPORPHYRIN IX CONTAINING FE
lig 156
HEM
G
809 43PROTOPORPHYRIN IX CONTAINING FE
lig 157
HEM
G
810 43PROTOPORPHYRIN IX CONTAINING FE
lig 158
HEM
G
811 43PROTOPORPHYRIN IX CONTAINING FE
lig 159
HEM
G
812 43PROTOPORPHYRIN IX CONTAINING FE
lig 160
HEM
G
813 43PROTOPORPHYRIN IX CONTAINING FE
lig 161
SO2
G
814 3SULFUR DIOXIDE