Analysis of Ligand-Protein Contacts in PDB entry:
4RYU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 4RYU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PO4
A
301 5PHOSPHATE ION
lig 2
PO4
A
302 5PHOSPHATE ION
lig 3
PO4
A
303 5PHOSPHATE ION
lig 4
PO4
A
304 5PHOSPHATE ION
lig 5
PO4
A
305 5PHOSPHATE ION
lig 6
MG
A
306 1MAGNESIUM ION
lig 7
PO4
B
301 5PHOSPHATE ION
lig 8
MG
B
302 1MAGNESIUM ION
lig 9
GOL
B
303 6GLYCEROL
lig 10
MPD
B
304 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 11
MPD
B
305 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 12
MPD
B
306 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 13
PO4
C
301 5PHOSPHATE ION
lig 14
MG
C
302 1MAGNESIUM ION
lig 15
GOL
C
303 6GLYCEROL
lig 16
GOL
C
304 6GLYCEROL
lig 17
MPD
C
305 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 18
PO4
D
301 5PHOSPHATE ION
lig 19
MG
D
302 1MAGNESIUM ION
lig 20
GOL
D
303 6GLYCEROL
lig 21
MPD
D
304 8(4S)-2-METHYL-2,4-PENTANEDIOL