Analysis of Ligand-Protein Contacts in PDB entry:
4TNJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 184 ligands in PDB entry 4TNJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FE2
A
401 1FE (II) ION
lig 2
CLA
A
402 65CHLOROPHYLL A
lig 3
CLA
A
403 65CHLOROPHYLL A
lig 4
CLA
A
404 65CHLOROPHYLL A
lig 5
CLA
A
405 65CHLOROPHYLL A
lig 6
PL9
A
406 45 BENZOQUINONE
lig 7
BCR
A
407 40BETA-CAROTENE
lig 8
DGD
A
408 56DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 9
LHG
A
409 391,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 10
LMG
A
410 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 11
CL
A
411 1CHLORIDE ION
lig 12
OEX
A
412 10CA-MN4-O5 CLUSTER
lig 13
SQD
A
413 51 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 14
SQD
A
414 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 15
LMG
A
415 421,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 16
CLA
B
601 65CHLOROPHYLL A
lig 17
CLA
B
602 65CHLOROPHYLL A
lig 18
CLA
B
603 65CHLOROPHYLL A
lig 19
CLA
B
604 65CHLOROPHYLL A
lig 20
CLA
B
605 65CHLOROPHYLL A
lig 21
CLA
B
606 65CHLOROPHYLL A
lig 22
CLA
B
607 65CHLOROPHYLL A
lig 23
CLA
B
608 65CHLOROPHYLL A
lig 24
CLA
B
609 65CHLOROPHYLL A
lig 25
CLA
B
610 65CHLOROPHYLL A
lig 26
CLA
B
611 65CHLOROPHYLL A
lig 27
CLA
B
612 65CHLOROPHYLL A
lig 28
CLA
B
613 65CHLOROPHYLL A
lig 29
CLA
B
614 65CHLOROPHYLL A
lig 30
CLA
B
615 65CHLOROPHYLL A
lig 31
BCR
B
616 40BETA-CAROTENE
lig 32
BCR
B
617 40BETA-CAROTENE
lig 33
BCR
B
618 40BETA-CAROTENE
lig 34
BCR
B
619 40BETA-CAROTENE
lig 35
DGD
B
620 58DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 36
LMG
B
621 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 37
LMT
B
622 35DODECYL-BETA-D-MALTOSIDE
lig 38
LMT
B
623 35DODECYL-BETA-D-MALTOSIDE
lig 39
LMG
B
624 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 40
DGD
B
625 52DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 41
SQD
B
626 47 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 42
LMT
B
627 35DODECYL-BETA-D-MALTOSIDE
lig 43
LMT
B
628 35DODECYL-BETA-D-MALTOSIDE
lig 44
CLA
C
501 65CHLOROPHYLL A
lig 45
CLA
C
502 65CHLOROPHYLL A
lig 46
CLA
C
503 65CHLOROPHYLL A
lig 47
CLA
C
504 65CHLOROPHYLL A
lig 48
CLA
C
505 65CHLOROPHYLL A
lig 49
CLA
C
506 65CHLOROPHYLL A
lig 50
CLA
C
507 65CHLOROPHYLL A
lig 51
CLA
C
508 65CHLOROPHYLL A
lig 52
CLA
C
509 65CHLOROPHYLL A
lig 53
CLA
C
510 65CHLOROPHYLL A
lig 54
CLA
C
511 65CHLOROPHYLL A
lig 55
CLA
C
512 65CHLOROPHYLL A
lig 56
BCR
C
513 40BETA-CAROTENE
lig 57
BCR
C
514 40BETA-CAROTENE
lig 58
DGD
C
515 53DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 59
DGD
C
516 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 60
DGD
C
517 66DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 61
LMG
C
518 451,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 62
LHG
C
519 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 63
CLA
C
520 65CHLOROPHYLL A
lig 64
BCR
C
521 40BETA-CAROTENE
lig 65
LMG
C
522 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 66
PHO
D
401 64PHEOPHYTIN A
lig 67
PHO
D
402 64PHEOPHYTIN A
lig 68
SQD
D
403 43 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 69
BCT
D
404 4BICARBONATE ION
lig 70
CLA
D
405 65CHLOROPHYLL A
lig 71
CLA
D
406 65CHLOROPHYLL A
lig 72
PL9
D
407 55 BENZOQUINONE
lig 73
LMG
D
408 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 74
DGD
D
409 63DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 75
LMT
D
410 31DODECYL-BETA-D-MALTOSIDE
lig 76
BCR
D
411 40BETA-CAROTENE
lig 77
LMG
D
412 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 78
LMG
E
101 441,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 79
HEM
F
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 80
SQD
F
102 45 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 81
CLA
H
101 65CHLOROPHYLL A
lig 82
BCR
H
102 40BETA-CAROTENE
lig 83
LMG
I
101 431,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 84
LMT
I
102 35DODECYL-BETA-D-MALTOSIDE
lig 85
PL9
J
101 35 BENZOQUINONE
lig 86
BCR
J
102 40BETA-CAROTENE
lig 87
CA
K
101 1CALCIUM ION
lig 88
LMG
M
101 421,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 89
LMT
M
102 35DODECYL-BETA-D-MALTOSIDE
lig 90
LMT
M
103 35DODECYL-BETA-D-MALTOSIDE
lig 91
CA
O
301 1CALCIUM ION
lig 92
HEM
V
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 93
BCR
y
101 40BETA-CAROTENE
lig 94
SQD
a
401 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 95
LMG
a
402 421,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 96
FE2
a
403 1FE (II) ION
lig 97
CLA
a
404 65CHLOROPHYLL A
lig 98
CLA
a
405 65CHLOROPHYLL A
lig 99
CLA
a
406 65CHLOROPHYLL A
lig 100
PHO
a
407 64PHEOPHYTIN A
lig 101
CLA
a
408 65CHLOROPHYLL A
lig 102
PL9
a
409 45 BENZOQUINONE
lig 103
BCR
a
410 40BETA-CAROTENE
lig 104
DGD
a
411 56DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 105
LHG
a
412 391,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 106
LMG
a
413 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 107
OEX
a
414 10CA-MN4-O5 CLUSTER
lig 108
SQD
a
415 51 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 109
CL
a
416 1CHLORIDE ION
lig 110
DGD
b
601 52DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 111
SQD
b
602 47 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 112
LMT
b
603 35DODECYL-BETA-D-MALTOSIDE
lig 113
LMT
b
604 35DODECYL-BETA-D-MALTOSIDE
lig 114
CLA
b
605 65CHLOROPHYLL A
lig 115
CLA
b
606 65CHLOROPHYLL A
lig 116
CLA
b
607 65CHLOROPHYLL A
lig 117
CLA
b
608 65CHLOROPHYLL A
lig 118
CLA
b
609 65CHLOROPHYLL A
lig 119
CLA
b
610 65CHLOROPHYLL A
lig 120
CLA
b
611 65CHLOROPHYLL A
lig 121
CLA
b
612 65CHLOROPHYLL A
lig 122
CLA
b
613 65CHLOROPHYLL A
lig 123
CLA
b
614 65CHLOROPHYLL A
lig 124
CLA
b
615 65CHLOROPHYLL A
lig 125
CLA
b
616 65CHLOROPHYLL A
lig 126
CLA
b
617 65CHLOROPHYLL A
lig 127
CLA
b
618 65CHLOROPHYLL A
lig 128
CLA
b
619 65CHLOROPHYLL A
lig 129
BCR
b
620 40BETA-CAROTENE
lig 130
BCR
b
621 40BETA-CAROTENE
lig 131
BCR
b
622 40BETA-CAROTENE
lig 132
BCR
b
623 40BETA-CAROTENE
lig 133
DGD
b
624 58DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 134
LMG
b
625 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 135
LMT
b
626 35DODECYL-BETA-D-MALTOSIDE
lig 136
LMT
b
627 35DODECYL-BETA-D-MALTOSIDE
lig 137
LMG
b
628 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 138
CLA
c
501 65CHLOROPHYLL A
lig 139
CLA
c
502 65CHLOROPHYLL A
lig 140
CLA
c
503 65CHLOROPHYLL A
lig 141
CLA
c
504 65CHLOROPHYLL A
lig 142
CLA
c
505 65CHLOROPHYLL A
lig 143
CLA
c
506 65CHLOROPHYLL A
lig 144
CLA
c
507 65CHLOROPHYLL A
lig 145
CLA
c
508 65CHLOROPHYLL A
lig 146
CLA
c
509 65CHLOROPHYLL A
lig 147
CLA
c
510 65CHLOROPHYLL A
lig 148
CLA
c
511 65CHLOROPHYLL A
lig 149
CLA
c
512 65CHLOROPHYLL A
lig 150
BCR
c
513 40BETA-CAROTENE
lig 151
BCR
c
514 40BETA-CAROTENE
lig 152
DGD
c
515 53DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 153
DGD
c
516 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 154
DGD
c
517 66DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 155
LMG
c
518 451,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 156
LHG
c
519 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 157
CLA
c
520 65CHLOROPHYLL A
lig 158
BCR
c
521 40BETA-CAROTENE
lig 159
LMG
c
522 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 160
PHO
d
401 64PHEOPHYTIN A
lig 161
SQD
d
402 43 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 162
BCT
d
403 4BICARBONATE ION
lig 163
CLA
d
404 65CHLOROPHYLL A
lig 164
CLA
d
405 65CHLOROPHYLL A
lig 165
PL9
d
406 55 BENZOQUINONE
lig 166
LMG
d
407 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 167
DGD
d
408 63DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 168
LMT
d
409 31DODECYL-BETA-D-MALTOSIDE
lig 169
LMG
d
410 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 170
LMG
e
101 441,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 171
HEM
f
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 172
BCR
f
102 40BETA-CAROTENE
lig 173
SQD
f
103 45 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 174
CLA
h
101 65CHLOROPHYLL A
lig 175
LMG
i
101 431,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 176
LMT
i
102 35DODECYL-BETA-D-MALTOSIDE
lig 177
PL9
j
101 35 BENZOQUINONE
lig 178
BCR
j
102 40BETA-CAROTENE
lig 179
CA
k
101 1CALCIUM ION
lig 180
LMG
m
101 421,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 181
CA
o
301 1CALCIUM ION
lig 182
HEM
v
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 183
BCR
g
101 40BETA-CAROTENE
lig 184
BCR
x
101 40BETA-CAROTENE