Analysis of Ligand-Protein Contacts in PDB entry:
4TNK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 184 ligands in PDB entry 4TNK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FE2
A
401 1FE (II) ION
lig 2
CLA
A
402 65CHLOROPHYLL A
lig 3
CLA
A
403 65CHLOROPHYLL A
lig 4
CLA
A
404 65CHLOROPHYLL A
lig 5
PHO
A
405 64PHEOPHYTIN A
lig 6
CLA
A
406 65CHLOROPHYLL A
lig 7
PL9
A
407 45 BENZOQUINONE
lig 8
BCR
A
408 40BETA-CAROTENE
lig 9
DGD
A
409 56DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 10
LHG
A
410 391,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 11
CL
A
411 1CHLORIDE ION
lig 12
OEX
A
412 10CA-MN4-O5 CLUSTER
lig 13
SQD
A
413 51 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 14
SQD
A
414 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 15
CLA
B
601 65CHLOROPHYLL A
lig 16
CLA
B
602 65CHLOROPHYLL A
lig 17
CLA
B
603 65CHLOROPHYLL A
lig 18
CLA
B
604 65CHLOROPHYLL A
lig 19
CLA
B
605 65CHLOROPHYLL A
lig 20
CLA
B
606 65CHLOROPHYLL A
lig 21
CLA
B
607 65CHLOROPHYLL A
lig 22
CLA
B
608 65CHLOROPHYLL A
lig 23
CLA
B
609 65CHLOROPHYLL A
lig 24
CLA
B
610 65CHLOROPHYLL A
lig 25
CLA
B
611 65CHLOROPHYLL A
lig 26
CLA
B
612 65CHLOROPHYLL A
lig 27
CLA
B
613 65CHLOROPHYLL A
lig 28
CLA
B
614 65CHLOROPHYLL A
lig 29
CLA
B
615 65CHLOROPHYLL A
lig 30
BCR
B
616 40BETA-CAROTENE
lig 31
BCR
B
617 40BETA-CAROTENE
lig 32
BCR
B
618 40BETA-CAROTENE
lig 33
BCR
B
619 40BETA-CAROTENE
lig 34
DGD
B
620 58DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 35
LMG
B
621 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 36
SQD
B
622 43 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 37
LMT
B
623 35DODECYL-BETA-D-MALTOSIDE
lig 38
LMT
B
624 35DODECYL-BETA-D-MALTOSIDE
lig 39
LMG
B
625 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 40
DGD
B
626 52DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 41
SQD
B
627 47 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 42
LMT
B
628 35DODECYL-BETA-D-MALTOSIDE
lig 43
LMT
B
629 35DODECYL-BETA-D-MALTOSIDE
lig 44
CLA
C
501 65CHLOROPHYLL A
lig 45
CLA
C
502 65CHLOROPHYLL A
lig 46
CLA
C
503 65CHLOROPHYLL A
lig 47
CLA
C
504 65CHLOROPHYLL A
lig 48
CLA
C
505 65CHLOROPHYLL A
lig 49
CLA
C
506 65CHLOROPHYLL A
lig 50
CLA
C
507 65CHLOROPHYLL A
lig 51
CLA
C
508 65CHLOROPHYLL A
lig 52
CLA
C
509 65CHLOROPHYLL A
lig 53
CLA
C
510 65CHLOROPHYLL A
lig 54
CLA
C
511 65CHLOROPHYLL A
lig 55
CLA
C
512 65CHLOROPHYLL A
lig 56
BCR
C
513 40BETA-CAROTENE
lig 57
DGD
C
514 53DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 58
DGD
C
515 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 59
DGD
C
516 66DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 60
LMG
C
517 451,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 61
LHG
C
518 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 62
CLA
C
519 65CHLOROPHYLL A
lig 63
BCR
C
520 40BETA-CAROTENE
lig 64
LMG
C
521 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 65
PHO
D
401 64PHEOPHYTIN A
lig 66
BCT
D
402 4BICARBONATE ION
lig 67
CLA
D
403 65CHLOROPHYLL A
lig 68
CLA
D
404 65CHLOROPHYLL A
lig 69
PL9
D
405 55 BENZOQUINONE
lig 70
LMG
D
406 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 71
DGD
D
407 63DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 72
LMT
D
408 31DODECYL-BETA-D-MALTOSIDE
lig 73
LMG
D
409 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 74
LMG
E
101 441,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 75
HEM
F
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 76
BCR
F
102 40BETA-CAROTENE
lig 77
SQD
F
103 45 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 78
CLA
H
101 65CHLOROPHYLL A
lig 79
BCR
H
102 40BETA-CAROTENE
lig 80
LMG
I
101 431,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 81
LMT
I
102 35DODECYL-BETA-D-MALTOSIDE
lig 82
PL9
J
101 35 BENZOQUINONE
lig 83
BCR
J
102 40BETA-CAROTENE
lig 84
BCR
K
101 40BETA-CAROTENE
lig 85
CA
K
102 1CALCIUM ION
lig 86
LMG
L
101 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 87
LMG
M
101 421,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 88
LMT
M
102 35DODECYL-BETA-D-MALTOSIDE
lig 89
LMT
M
103 35DODECYL-BETA-D-MALTOSIDE
lig 90
CA
O
301 1CALCIUM ION
lig 91
HEM
V
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 92
BCR
y
101 40BETA-CAROTENE
lig 93
SQD
a
401 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 94
LMG
a
402 421,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 95
CLA
a
403 65CHLOROPHYLL A
lig 96
CLA
a
404 65CHLOROPHYLL A
lig 97
CLA
a
405 65CHLOROPHYLL A
lig 98
CLA
a
406 65CHLOROPHYLL A
lig 99
PL9
a
407 45 BENZOQUINONE
lig 100
DGD
a
408 56DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 101
LHG
a
409 391,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 102
CL
a
410 1CHLORIDE ION
lig 103
OEX
a
411 10CA-MN4-O5 CLUSTER
lig 104
SQD
a
412 51 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 105
FE2
a
413 1FE (II) ION
lig 106
DGD
b
601 52DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 107
SQD
b
602 47 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 108
LMT
b
603 35DODECYL-BETA-D-MALTOSIDE
lig 109
LMT
b
604 35DODECYL-BETA-D-MALTOSIDE
lig 110
CLA
b
605 65CHLOROPHYLL A
lig 111
CLA
b
606 65CHLOROPHYLL A
lig 112
CLA
b
607 65CHLOROPHYLL A
lig 113
CLA
b
608 65CHLOROPHYLL A
lig 114
CLA
b
609 65CHLOROPHYLL A
lig 115
CLA
b
610 65CHLOROPHYLL A
lig 116
CLA
b
611 65CHLOROPHYLL A
lig 117
CLA
b
612 65CHLOROPHYLL A
lig 118
CLA
b
613 65CHLOROPHYLL A
lig 119
CLA
b
614 65CHLOROPHYLL A
lig 120
CLA
b
615 65CHLOROPHYLL A
lig 121
CLA
b
616 65CHLOROPHYLL A
lig 122
CLA
b
617 65CHLOROPHYLL A
lig 123
CLA
b
618 65CHLOROPHYLL A
lig 124
CLA
b
619 65CHLOROPHYLL A
lig 125
CLA
b
620 65CHLOROPHYLL A
lig 126
BCR
b
621 40BETA-CAROTENE
lig 127
BCR
b
622 40BETA-CAROTENE
lig 128
BCR
b
623 40BETA-CAROTENE
lig 129
BCR
b
624 40BETA-CAROTENE
lig 130
DGD
b
625 58DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 131
LMG
b
626 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 132
LMG
b
627 421,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 133
LMT
b
628 35DODECYL-BETA-D-MALTOSIDE
lig 134
LMT
b
629 35DODECYL-BETA-D-MALTOSIDE
lig 135
CLA
c
501 65CHLOROPHYLL A
lig 136
CLA
c
502 65CHLOROPHYLL A
lig 137
CLA
c
503 65CHLOROPHYLL A
lig 138
CLA
c
504 65CHLOROPHYLL A
lig 139
CLA
c
505 65CHLOROPHYLL A
lig 140
CLA
c
506 65CHLOROPHYLL A
lig 141
CLA
c
507 65CHLOROPHYLL A
lig 142
CLA
c
508 65CHLOROPHYLL A
lig 143
CLA
c
509 65CHLOROPHYLL A
lig 144
CLA
c
510 65CHLOROPHYLL A
lig 145
CLA
c
511 65CHLOROPHYLL A
lig 146
CLA
c
512 65CHLOROPHYLL A
lig 147
BCR
c
513 40BETA-CAROTENE
lig 148
BCR
c
514 40BETA-CAROTENE
lig 149
DGD
c
515 53DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 150
DGD
c
516 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 151
DGD
c
517 66DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 152
LMG
c
518 451,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 153
LHG
c
519 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 154
CLA
c
520 65CHLOROPHYLL A
lig 155
BCR
c
521 40BETA-CAROTENE
lig 156
LMG
c
522 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 157
PHO
d
401 64PHEOPHYTIN A
lig 158
PHO
d
402 64PHEOPHYTIN A
lig 159
SQD
d
403 43 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 160
BCT
d
404 4BICARBONATE ION
lig 161
CLA
d
405 65CHLOROPHYLL A
lig 162
CLA
d
406 65CHLOROPHYLL A
lig 163
PL9
d
407 55 BENZOQUINONE
lig 164
LMG
d
408 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 165
LMG
d
409 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 166
DGD
d
410 63DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 167
LMT
d
411 31DODECYL-BETA-D-MALTOSIDE
lig 168
LMG
d
412 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 169
LMG
e
101 441,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 170
HEM
f
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 171
BCR
f
102 40BETA-CAROTENE
lig 172
SQD
f
103 45 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 173
BCR
i
101 40BETA-CAROTENE
lig 174
LMG
i
102 431,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 175
LMT
i
103 35DODECYL-BETA-D-MALTOSIDE
lig 176
PL9
j
101 35 BENZOQUINONE
lig 177
BCR
j
102 40BETA-CAROTENE
lig 178
CA
k
101 1CALCIUM ION
lig 179
LMG
l
101 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 180
LMG
m
101 421,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 181
CA
o
301 1CALCIUM ION
lig 182
HEM
v
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 183
BCR
g
101 40BETA-CAROTENE
lig 184
BCR
x
101 40BETA-CAROTENE