Analysis of Ligand-Protein Contacts in PDB entry:
4WKM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 47 ligands in PDB entry 4WKM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FGA
I
2 9GAMMA-D-GLUTAMIC ACID
lig 2
API
I
3 122,6-DIAMINOPIMELIC ACID
lig 3
DAL
I
4 5D-ALANINE
lig 4
DAL
I
5 6D-ALANINE
lig 5
FGA
J
2 9GAMMA-D-GLUTAMIC ACID
lig 6
API
J
3 122,6-DIAMINOPIMELIC ACID
lig 7
DAL
J
4 5D-ALANINE
lig 8
DAL
J
5 6D-ALANINE
lig 9
FGA
K
2 9GAMMA-D-GLUTAMIC ACID
lig 10
API
K
3 122,6-DIAMINOPIMELIC ACID
lig 11
DAL
K
4 5D-ALANINE
lig 12
DAL
K
5 6D-ALANINE
lig 13
FGA
L
2 9GAMMA-D-GLUTAMIC ACID
lig 14
API
L
3 122,6-DIAMINOPIMELIC ACID
lig 15
DAL
L
4 5D-ALANINE
lig 16
DAL
L
5 6D-ALANINE
lig 17
FGA
M
2 9GAMMA-D-GLUTAMIC ACID
lig 18
API
M
3 122,6-DIAMINOPIMELIC ACID
lig 19
DAL
M
4 5D-ALANINE
lig 20
DAL
M
5 6D-ALANINE
lig 21
FGA
N
2 9GAMMA-D-GLUTAMIC ACID
lig 22
API
N
3 122,6-DIAMINOPIMELIC ACID
lig 23
DAL
N
4 5D-ALANINE
lig 24
DAL
N
5 6D-ALANINE
lig 25
FGA
O
2 9GAMMA-D-GLUTAMIC ACID
lig 26
API
O
3 122,6-DIAMINOPIMELIC ACID
lig 27
DAL
O
4 5D-ALANINE
lig 28
DAL
O
5 6D-ALANINE
lig 29
FGA
P
2 9GAMMA-D-GLUTAMIC ACID
lig 30
API
P
3 122,6-DIAMINOPIMELIC ACID
lig 31
DAL
P
4 5D-ALANINE
lig 32
DAL
P
5 6D-ALANINE
lig 33
GOL
A
401 6GLYCEROL
lig 34
GOL
C
401 6GLYCEROL
lig 35
GOL
D
401 6GLYCEROL
lig 36
GOL
E
401 6GLYCEROL
lig 37
GOL
F
401 6GLYCEROL
lig 38
GOL
G
401 6GLYCEROL
lig 39
GOL
H
401 6GLYCEROL
lig 40
MUB
I
401 19N-ACETYL-ALPHA-MURAMIC ACID
lig 41
MUB
J
101 5N-ACETYL-ALPHA-MURAMIC ACID
lig 42
MUB
K
401 19N-ACETYL-ALPHA-MURAMIC ACID
lig 43
MUB
L
401 5N-ACETYL-ALPHA-MURAMIC ACID
lig 44
MUB
M
401 5N-ACETYL-ALPHA-MURAMIC ACID
lig 45
MUB
N
401 19N-ACETYL-ALPHA-MURAMIC ACID
lig 46
MUB
O
401 5N-ACETYL-ALPHA-MURAMIC ACID
lig 47
MUB
P
401 19N-ACETYL-ALPHA-MURAMIC ACID