Analysis of Ligand-Protein Contacts in PDB entry:
4YAQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 4YAQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PCA
H
2 8PYROGLUTAMIC ACID
lig 2
TYS
H
100 32O-SULFO-L-TYROSINE
lig 3
PCA
A
2 8PYROGLUTAMIC ACID
lig 4
TYS
A
100 32O-SULFO-L-TYROSINE
lig 5
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 8
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 11
MES
H
301 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 12
PO4
H
302 5PHOSPHATE ION
lig 13
MES
L
304 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 14
MES
L
305 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 15
PO4
L
306 5PHOSPHATE ION
lig 16
MES
B
304 122-(N-MORPHOLINO)-ETHANESULFONIC ACID