Analysis of Ligand-Protein Contacts in PDB entry:
4YB4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 66 ligands in PDB entry 4YB4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
401 1MAGNESIUM ION
lig 2
48Y
A
402 14(1R,2S)-1-HYDROXYBUTANE-1,2,4-TRICARBOXYLI
lig 3
NAI
A
403 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 4
MG
A
404 1MAGNESIUM ION
lig 5
GOL
A
405 6GLYCEROL
lig 6
GOL
A
406 6GLYCEROL
lig 7
GOL
A
407 6GLYCEROL
lig 8
GOL
A
408 6GLYCEROL
lig 9
SO4
A
409 5SULFATE ION
lig 10
SO4
A
410 5SULFATE ION
lig 11
SO4
A
411 5SULFATE ION
lig 12
SO4
A
412 5SULFATE ION
lig 13
SO4
A
413 5SULFATE ION
lig 14
SO4
A
414 5SULFATE ION
lig 15
SO4
A
415 5SULFATE ION
lig 16
48Y
B
401 14(1R,2S)-1-HYDROXYBUTANE-1,2,4-TRICARBOXYLI
lig 17
NAI
B
402 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 18
GOL
B
403 6GLYCEROL
lig 19
GOL
B
404 6GLYCEROL
lig 20
GOL
B
405 6GLYCEROL
lig 21
GOL
B
406 6GLYCEROL
lig 22
GOL
B
407 6GLYCEROL
lig 23
GOL
B
408 6GLYCEROL
lig 24
SO4
B
409 5SULFATE ION
lig 25
SO4
B
410 5SULFATE ION
lig 26
SO4
B
411 5SULFATE ION
lig 27
SO4
B
412 5SULFATE ION
lig 28
SO4
B
413 5SULFATE ION
lig 29
SO4
B
414 5SULFATE ION
lig 30
SO4
B
415 5SULFATE ION
lig 31
SO4
B
416 5SULFATE ION
lig 32
MG
C
401 1MAGNESIUM ION
lig 33
48Y
C
402 14(1R,2S)-1-HYDROXYBUTANE-1,2,4-TRICARBOXYLI
lig 34
NAI
C
403 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 35
MG
C
404 1MAGNESIUM ION
lig 36
GOL
C
405 6GLYCEROL
lig 37
GOL
C
406 6GLYCEROL
lig 38
GOL
C
407 6GLYCEROL
lig 39
GOL
C
408 6GLYCEROL
lig 40
GOL
C
409 6GLYCEROL
lig 41
GOL
C
410 6GLYCEROL
lig 42
GOL
C
411 6GLYCEROL
lig 43
GOL
C
412 6GLYCEROL
lig 44
SO4
C
413 5SULFATE ION
lig 45
SO4
C
414 5SULFATE ION
lig 46
SO4
C
415 5SULFATE ION
lig 47
SO4
C
416 5SULFATE ION
lig 48
SO4
C
417 5SULFATE ION
lig 49
SO4
C
418 5SULFATE ION
lig 50
SO4
C
419 5SULFATE ION
lig 51
SO4
C
420 5SULFATE ION
lig 52
SO4
C
421 5SULFATE ION
lig 53
SO4
C
422 5SULFATE ION
lig 54
48Y
D
401 14(1R,2S)-1-HYDROXYBUTANE-1,2,4-TRICARBOXYLI
lig 55
NAI
D
402 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 56
GOL
D
403 6GLYCEROL
lig 57
GOL
D
404 6GLYCEROL
lig 58
GOL
D
405 6GLYCEROL
lig 59
GOL
D
406 6GLYCEROL
lig 60
GOL
D
407 6GLYCEROL
lig 61
GOL
D
408 6GLYCEROL
lig 62
SO4
D
409 5SULFATE ION
lig 63
SO4
D
410 5SULFATE ION
lig 64
SO4
D
411 5SULFATE ION
lig 65
SO4
D
412 5SULFATE ION
lig 66
SO4
D
413 5SULFATE ION