Analysis of Ligand-Protein Contacts in PDB entry:
4YFU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 4YFU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CME
A
388 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 2
CME
D
388 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 3
2DT
B
101 193'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE
lig 4
2DT
E
101 193'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE
lig 5
GLC
G
1 11ALPHA-D-GLUCOPYRANOSE
lig 6
FRU
G
2 12BETA-D-FRUCTOFURANOSE
lig 7
GLC
H
1 11ALPHA-D-GLUCOPYRANOSE
lig 8
FRU
H
2 12BETA-D-FRUCTOFURANOSE
lig 9
TTP
A
901 29THYMIDINE-5'-TRIPHOSPHATE
lig 10
SO4
D
901 5SULFATE ION