Analysis of Ligand-Protein Contacts in PDB entry:
4YK9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 12 ligands in PDB entry 4YK9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NLG
B
1 12N-ACETYL-L-GLUTAMATE
lig 2
SEP
B
14 10PHOSPHOSERINE
lig 3
AAR
B
21 12ARGININEAMIDE
lig 4
NLG
G
1 12N-ACETYL-L-GLUTAMATE
lig 5
SEP
G
14 10PHOSPHOSERINE
lig 6
AAR
G
21 12ARGININEAMIDE
lig 7
ACT
A
201 4ACETATE ION
lig 8
CL
A
202 1CHLORIDE ION
lig 9
CL
A
203 1CHLORIDE ION
lig 10
ACT
A
204 4ACETATE ION
lig 11
ACT
F
201 4ACETATE ION
lig 12
CL
F
202 1CHLORIDE ION