Analysis of Ligand-Protein Contacts in PDB entry:
5A7M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 70 ligands in PDB entry 5A7M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PCA
A
1 8PYROGLUTAMIC ACID
lig 2
PCA
B
1 8PYROGLUTAMIC ACID
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 22
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 25
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 26
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 29
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 31
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
A
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
A
1001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
A
1201 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
A
1301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
A
1801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
ZN
A
1901 1ZINC ION
lig 41
ZN
A
1902 1ZINC ION
lig 42
ZN
A
1903 1ZINC ION
lig 43
ZN
A
1904 1ZINC ION
lig 44
ZN
A
1907 1ZINC ION
lig 45
ZN
A
1908 1ZINC ION
lig 46
ZN
A
1909 1ZINC ION
lig 47
ZN
A
1915 1ZINC ION
lig 48
ZN
A
1916 1ZINC ION
lig 49
TRS
A
1920 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 50
TRS
A
1921 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 51
GOL
A
1922 6GLYCEROL
lig 52
ACT
A
1923 4ACETATE ION
lig 53
NAG
B
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
B
1001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
B
1701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
ZN
B
1901 1ZINC ION
lig 57
ZN
B
1903 1ZINC ION
lig 58
ZN
B
1904 1ZINC ION
lig 59
ZN
B
1905 1ZINC ION
lig 60
ZN
B
1906 1ZINC ION
lig 61
ZN
B
1907 1ZINC ION
lig 62
ZN
B
1911 1ZINC ION
lig 63
ZN
B
1912 1ZINC ION
lig 64
ZN
B
1913 1ZINC ION
lig 65
ZN
B
1914 1ZINC ION
lig 66
ZN
B
1916 1ZINC ION
lig 67
TRS
B
1920 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 68
GOL
B
1922 6GLYCEROL
lig 69
GOL
B
1923 6GLYCEROL
lig 70
ACT
B
1924 4ACETATE ION