Analysis of Ligand-Protein Contacts in PDB entry:
5ACK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 8 ligands in PDB entry 5ACK. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
241 10PHOSPHOSERINE
lig 2
ATP
A
500 31ADENOSINE-5'-TRIPHOSPHATE
lig 3
SVQ
A
600 26 OXOPIPERIDINE-3-CARBOXYLIC ACID
lig 4
DTD
A
700 8DITHIANE DIOL
lig 5
DMS
A
800 4DIMETHYL SULFOXIDE
lig 6
NA
A
900 1SODIUM ION
lig 7
NA
A
901 1SODIUM ION
lig 8
NA
A
902 1SODIUM ION