Analysis of Ligand-Protein Contacts in PDB entry:
5AE6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 50 ligands in PDB entry 5AE6. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PCA
A
1 8PYROGLUTAMIC ACID
lig 2
PCA
B
1 8PYROGLUTAMIC ACID
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 12
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
TXB
G
1 104-DEOXY-4-THIO-ALPHA-D-XYLOPYRANOSE
lig 15
XYP
G
2 9BETA-D-XYLOPYRANOSE
lig 16
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 23
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 25
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
TXB
L
1 104-DEOXY-4-THIO-ALPHA-D-XYLOPYRANOSE
lig 28
XYP
L
2 9BETA-D-XYLOPYRANOSE
lig 29
NAG
A
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
A
1001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
A
1201 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
A
1301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
A
1801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
ZN
A
1901 1ZINC ION
lig 35
ZN
A
1902 1ZINC ION
lig 36
ZN
A
1904 1ZINC ION
lig 37
ZN
A
1906 1ZINC ION
lig 38
ZN
A
1911 1ZINC ION
lig 39
NAG
B
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
B
1001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
B
1301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
B
1701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
B
1801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
ZN
B
1901 1ZINC ION
lig 45
ZN
B
1904 1ZINC ION
lig 46
ZN
B
1906 1ZINC ION
lig 47
ZN
B
1907 1ZINC ION
lig 48
ZN
B
1910 1ZINC ION
lig 49
ZN
B
1911 1ZINC ION
lig 50
ZN
B
1914 1ZINC ION