Analysis of Ligand-Protein Contacts in PDB entry:
5AFJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 5AFJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
42R
A
1205 17 DIHYDROPYRIDIN-4(1H)-ONE
lig 4
42R
A
1206 17 DIHYDROPYRIDIN-4(1H)-ONE
lig 5
L0B
A
1207 25ALPHA-LOBELINE
lig 6
NAG
B
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
B
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
42R
B
1205 17 DIHYDROPYRIDIN-4(1H)-ONE
lig 9
42R
B
1206 17 DIHYDROPYRIDIN-4(1H)-ONE
lig 10
L0B
B
1207 25ALPHA-LOBELINE
lig 11
NAG
C
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
C
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
42R
C
1205 17 DIHYDROPYRIDIN-4(1H)-ONE
lig 14
42R
C
1206 17 DIHYDROPYRIDIN-4(1H)-ONE
lig 15
L0B
C
1207 25ALPHA-LOBELINE
lig 16
GOL
C
1208 6GLYCEROL
lig 17
NAG
D
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
D
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
D
303 11BETA-D-MANNOPYRANOSE
lig 20
MAN
D
304 11ALPHA-D-MANNOPYRANOSE
lig 21
42R
D
1205 17 DIHYDROPYRIDIN-4(1H)-ONE
lig 22
42R
D
1206 17 DIHYDROPYRIDIN-4(1H)-ONE
lig 23
L0B
D
1207 25ALPHA-LOBELINE
lig 24
GOL
D
1208 6GLYCEROL
lig 25
NAG
E
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
E
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
42R
E
1205 17 DIHYDROPYRIDIN-4(1H)-ONE
lig 28
42R
E
1206 17 DIHYDROPYRIDIN-4(1H)-ONE
lig 29
L0B
E
1207 25ALPHA-LOBELINE
lig 30
GOL
E
1208 6GLYCEROL