Analysis of Ligand-Protein Contacts in PDB entry:
5AGW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5AGW. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
C
-1 3ACETYL GROUP
lig 2
XCP
C
2 8(1S,2S)-2-AMINOCYCLOPENTANECARBOXYLIC ACID
lig 3
AJE
C
6 15 CARBOXYLIC ACID
lig 4
MH8
C
9 9(2S)-2-AMINO-2-METHYLHEPT-6-ENOIC ACID
lig 5
MH8
C
13 9(2S)-2-AMINO-2-METHYLHEPT-6-ENOIC ACID
lig 6
XCP
C
16 8(1S,2S)-2-AMINOCYCLOPENTANECARBOXYLIC ACID
lig 7
ACE
D
-1 3ACETYL GROUP
lig 8
XCP
D
2 8(1S,2S)-2-AMINOCYCLOPENTANECARBOXYLIC ACID
lig 9
AJE
D
6 15 CARBOXYLIC ACID
lig 10
MH8
D
9 9(2S)-2-AMINO-2-METHYLHEPT-6-ENOIC ACID
lig 11
MH8
D
13 9(2S)-2-AMINO-2-METHYLHEPT-6-ENOIC ACID
lig 12
XCP
D
16 8(1S,2S)-2-AMINOCYCLOPENTANECARBOXYLIC ACID