Analysis of Ligand-Protein Contacts in PDB entry:
5D4E


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 5D4E. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
B
2001 1MAGNESIUM ION
lig 2
ZN
D
2001 1ZINC ION
lig 3
ZN
D
2002 1ZINC ION
lig 4
MG
D
2003 1MAGNESIUM ION
lig 5
MG
D
2004 1MAGNESIUM ION
lig 6
C5P
D
2005 20CYTIDINE-5'-MONOPHOSPHATE
lig 7
DPO
D
2006 9DIPHOSPHATE
lig 8
MG
D
2007 1MAGNESIUM ION
lig 9
MG
F
2001 1MAGNESIUM ION
lig 10
COD
G
101 28DEPHOSPHO COENZYME A
lig 11
MG
L
1601 1MAGNESIUM ION
lig 12
ZN
N
1601 1ZINC ION
lig 13
ZN
N
1602 1ZINC ION
lig 14
MG
N
1603 1MAGNESIUM ION
lig 15
C5P
N
1604 20CYTIDINE-5'-MONOPHOSPHATE
lig 16
DPO
N
1605 9DIPHOSPHATE
lig 17
MG
N
1606 1MAGNESIUM ION
lig 18
MG
P
2001 1MAGNESIUM ION
lig 19
COD
R
101 27DEPHOSPHO COENZYME A