Analysis of Ligand-Protein Contacts in PDB entry:
5D4V


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 5D4V. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SAH
A
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 2
SO4
A
302 5SULFATE ION
lig 3
SO4
A
303 5SULFATE ION
lig 4
SO4
A
304 5SULFATE ION
lig 5
SAH
B
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 6
SO4
B
302 5SULFATE ION
lig 7
SO4
B
303 5SULFATE ION
lig 8
SO4
B
304 5SULFATE ION
lig 9
SO4
B
305 5SULFATE ION
lig 10
SO4
B
306 5SULFATE ION
lig 11
YGP
B
307 33 YL)OXY](HYDROXY)PHOSPHORYL]GUANOSINE
lig 12
SAH
C
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 13
SO4
C
302 5SULFATE ION
lig 14
SO4
C
303 5SULFATE ION
lig 15
SO4
C
304 5SULFATE ION
lig 16
SO4
C
305 5SULFATE ION
lig 17
SO4
C
306 5SULFATE ION
lig 18
SO4
C
307 5SULFATE ION
lig 19
YGP
C
308 33 YL)OXY](HYDROXY)PHOSPHORYL]GUANOSINE
lig 20
SAH
D
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 21
SO4
D
302 5SULFATE ION
lig 22
SO4
D
303 5SULFATE ION
lig 23
SO4
D
304 5SULFATE ION
lig 24
SO4
D
305 5SULFATE ION