Analysis of Ligand-Protein Contacts in PDB entry:
5DEP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5DEP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PO4
B
301 5PHOSPHATE ION
lig 2
UD1
B
302 39URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
lig 3
UD1
B
303 39URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
lig 4
PO4
B
304 5PHOSPHATE ION
lig 5
PO4
D
301 5PHOSPHATE ION
lig 6
UD1
D
302 39URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
lig 7
PO4
E
301 5PHOSPHATE ION
lig 8
UD1
E
302 39URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
lig 9
UD1
F
301 39URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
lig 10
UD1
F
302 39URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE