Analysis of Ligand-Protein Contacts in PDB entry:
5DFM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 5DFM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GLC
C
1 12ALPHA-D-GLUCOPYRANOSE
lig 2
GLC
C
2 11ALPHA-D-GLUCOPYRANOSE
lig 3
GLC
D
1 12ALPHA-D-GLUCOPYRANOSE
lig 4
GLC
D
2 11ALPHA-D-GLUCOPYRANOSE
lig 5
SO4
A
602 5SULFATE ION
lig 6
SO4
A
603 5SULFATE ION
lig 7
SO4
A
604 5SULFATE ION
lig 8
SO4
A
605 5SULFATE ION
lig 9
SO4
A
606 5SULFATE ION
lig 10
GOL
A
607 6GLYCEROL
lig 11
SO4
B
602 5SULFATE ION
lig 12
SO4
B
603 5SULFATE ION
lig 13
SO4
B
604 5SULFATE ION
lig 14
SO4
B
605 5SULFATE ION
lig 15
SO4
B
606 5SULFATE ION
lig 16
SO4
B
607 5SULFATE ION
lig 17
SO4
B
608 5SULFATE ION
lig 18
SO4
B
609 5SULFATE ION
lig 19
SO4
B
610 5SULFATE ION
lig 20
SO4
B
611 5SULFATE ION