Analysis of Ligand-Protein Contacts in PDB entry:
5E79


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 166 ligands in PDB entry 5E79. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OEX
A
601 10CA-MN4-O5 CLUSTER
lig 2
FE2
A
602 1FE (II) ION
lig 3
CL
A
603 1CHLORIDE ION
lig 4
CL
A
604 1CHLORIDE ION
lig 5
BCT
A
605 4BICARBONATE ION
lig 6
CLA
A
606 65CHLOROPHYLL A
lig 7
CLA
A
607 65CHLOROPHYLL A
lig 8
PHO
A
608 64PHEOPHYTIN A
lig 9
CLA
A
609 65CHLOROPHYLL A
lig 10
BCR
A
610 40BETA-CAROTENE
lig 11
PL9
A
611 55 BENZOQUINONE
lig 12
SQD
A
612 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 13
LMG
A
613 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 14
SQD
A
614 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 15
LHG
A
615 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 16
CA
B
601 1CALCIUM ION
lig 17
CLA
B
602 65CHLOROPHYLL A
lig 18
CLA
B
603 65CHLOROPHYLL A
lig 19
CLA
B
604 65CHLOROPHYLL A
lig 20
CLA
B
605 65CHLOROPHYLL A
lig 21
CLA
B
606 65CHLOROPHYLL A
lig 22
CLA
B
607 65CHLOROPHYLL A
lig 23
CLA
B
608 65CHLOROPHYLL A
lig 24
CLA
B
609 65CHLOROPHYLL A
lig 25
CLA
B
610 65CHLOROPHYLL A
lig 26
CLA
B
611 65CHLOROPHYLL A
lig 27
CLA
B
612 65CHLOROPHYLL A
lig 28
CLA
B
613 65CHLOROPHYLL A
lig 29
CLA
B
614 65CHLOROPHYLL A
lig 30
CLA
B
615 65CHLOROPHYLL A
lig 31
CLA
B
616 65CHLOROPHYLL A
lig 32
CLA
B
617 65CHLOROPHYLL A
lig 33
BCR
B
618 40BETA-CAROTENE
lig 34
BCR
B
619 40BETA-CAROTENE
lig 35
BCR
B
620 40BETA-CAROTENE
lig 36
LMG
B
621 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 37
SQD
B
622 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 38
CLA
C
501 65CHLOROPHYLL A
lig 39
CLA
C
502 65CHLOROPHYLL A
lig 40
CLA
C
503 65CHLOROPHYLL A
lig 41
CLA
C
504 65CHLOROPHYLL A
lig 42
CLA
C
505 65CHLOROPHYLL A
lig 43
CLA
C
506 65CHLOROPHYLL A
lig 44
CLA
C
507 65CHLOROPHYLL A
lig 45
CLA
C
508 65CHLOROPHYLL A
lig 46
CLA
C
509 65CHLOROPHYLL A
lig 47
CLA
C
510 65CHLOROPHYLL A
lig 48
CLA
C
511 65CHLOROPHYLL A
lig 49
CLA
C
512 65CHLOROPHYLL A
lig 50
CLA
C
513 65CHLOROPHYLL A
lig 51
BCR
C
514 40BETA-CAROTENE
lig 52
DGD
C
515 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 53
DGD
C
516 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 54
DGD
C
517 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 55
LMG
C
518 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 56
LMG
C
519 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 57
PHO
D
401 64PHEOPHYTIN A
lig 58
CLA
D
402 65CHLOROPHYLL A
lig 59
CLA
D
403 65CHLOROPHYLL A
lig 60
CLA
D
404 65CHLOROPHYLL A
lig 61
PL9
D
405 55 BENZOQUINONE
lig 62
LHG
D
406 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 63
LHG
D
407 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 64
LMG
D
408 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 65
DGD
E
101 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 66
LHG
E
102 421,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 67
HEM
E
103 43PROTOPORPHYRIN IX CONTAINING FE
lig 68
BCR
F
101 40BETA-CAROTENE
lig 69
CA
F
102 1CALCIUM ION
lig 70
BCR
H
101 40BETA-CAROTENE
lig 71
DGD
H
102 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 72
BCR
I
101 40BETA-CAROTENE
lig 73
MG
J
101 1MAGNESIUM ION
lig 74
BCR
K
101 40BETA-CAROTENE
lig 75
BCR
K
102 40BETA-CAROTENE
lig 76
LHG
L
101 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 77
SQD
L
102 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 78
CA
O
301 1CALCIUM ION
lig 79
BCR
T
101 40BETA-CAROTENE
lig 80
CL
U
201 1CHLORIDE ION
lig 81
HEM
V
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 82
SQD
X
101 43 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 83
LMG
Z
101 371,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 84
OEX
a
601 10CA-MN4-O5 CLUSTER
lig 85
FE2
a
602 1FE (II) ION
lig 86
CL
a
603 1CHLORIDE ION
lig 87
CL
a
604 1CHLORIDE ION
lig 88
BCT
a
605 4BICARBONATE ION
lig 89
CLA
a
606 65CHLOROPHYLL A
lig 90
CLA
a
607 65CHLOROPHYLL A
lig 91
PHO
a
608 64PHEOPHYTIN A
lig 92
CLA
a
609 65CHLOROPHYLL A
lig 93
BCR
a
610 40BETA-CAROTENE
lig 94
PL9
a
611 55 BENZOQUINONE
lig 95
SQD
a
612 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 96
LMG
a
613 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 97
SQD
a
614 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 98
CLA
a
615 65CHLOROPHYLL A
lig 99
LHG
a
616 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 100
SQD
b
601 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 101
CA
b
602 1CALCIUM ION
lig 102
CLA
b
603 65CHLOROPHYLL A
lig 103
CLA
b
604 65CHLOROPHYLL A
lig 104
CLA
b
605 65CHLOROPHYLL A
lig 105
CLA
b
606 65CHLOROPHYLL A
lig 106
CLA
b
607 65CHLOROPHYLL A
lig 107
CLA
b
608 65CHLOROPHYLL A
lig 108
CLA
b
609 65CHLOROPHYLL A
lig 109
CLA
b
610 65CHLOROPHYLL A
lig 110
CLA
b
611 65CHLOROPHYLL A
lig 111
CLA
b
612 65CHLOROPHYLL A
lig 112
CLA
b
613 65CHLOROPHYLL A
lig 113
CLA
b
614 65CHLOROPHYLL A
lig 114
CLA
b
615 65CHLOROPHYLL A
lig 115
CLA
b
616 65CHLOROPHYLL A
lig 116
CLA
b
617 65CHLOROPHYLL A
lig 117
CLA
b
618 65CHLOROPHYLL A
lig 118
BCR
b
619 40BETA-CAROTENE
lig 119
BCR
b
620 40BETA-CAROTENE
lig 120
BCR
b
621 40BETA-CAROTENE
lig 121
LMG
b
622 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 122
CLA
c
501 65CHLOROPHYLL A
lig 123
CLA
c
502 65CHLOROPHYLL A
lig 124
CLA
c
503 65CHLOROPHYLL A
lig 125
CLA
c
504 65CHLOROPHYLL A
lig 126
CLA
c
505 65CHLOROPHYLL A
lig 127
CLA
c
506 65CHLOROPHYLL A
lig 128
CLA
c
507 65CHLOROPHYLL A
lig 129
CLA
c
508 65CHLOROPHYLL A
lig 130
CLA
c
509 65CHLOROPHYLL A
lig 131
CLA
c
510 65CHLOROPHYLL A
lig 132
CLA
c
511 65CHLOROPHYLL A
lig 133
CLA
c
512 65CHLOROPHYLL A
lig 134
CLA
c
513 65CHLOROPHYLL A
lig 135
BCR
c
514 40BETA-CAROTENE
lig 136
BCR
c
515 40BETA-CAROTENE
lig 137
DGD
c
516 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 138
DGD
c
517 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 139
DGD
c
518 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 140
LMG
c
519 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 141
LMG
c
520 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 142
BCR
c
521 40BETA-CAROTENE
lig 143
PHO
d
401 64PHEOPHYTIN A
lig 144
CLA
d
402 65CHLOROPHYLL A
lig 145
CLA
d
403 65CHLOROPHYLL A
lig 146
PL9
d
404 55 BENZOQUINONE
lig 147
DGD
d
405 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 148
LHG
d
406 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 149
LHG
d
407 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 150
LHG
e
101 421,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 151
HEM
e
102 43PROTOPORPHYRIN IX CONTAINING FE
lig 152
BCR
f
101 40BETA-CAROTENE
lig 153
CA
f
102 1CALCIUM ION
lig 154
BCR
h
101 40BETA-CAROTENE
lig 155
DGD
h
102 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 156
LMG
j
101 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 157
MG
j
102 1MAGNESIUM ION
lig 158
BCR
k
101 40BETA-CAROTENE
lig 159
SQD
l
101 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 160
LHG
l
102 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 161
CA
o
301 1CALCIUM ION
lig 162
BCR
t
101 40BETA-CAROTENE
lig 163
CL
u
201 1CHLORIDE ION
lig 164
HEM
v
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 165
SQD
x
101 43 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 166
LMG
z
101 371,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE