Analysis of Ligand-Protein Contacts in PDB entry:
5FIB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 58 ligands in PDB entry 5FIB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 10
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 12
FUC
E
6 10ALPHA-L-FUCOPYRANOSE
lig 13
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 18
FUC
G
4 10ALPHA-L-FUCOPYRANOSE
lig 19
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 24
FUC
H
6 10ALPHA-L-FUCOPYRANOSE
lig 25
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 28
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 29
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 30
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 33
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 34
FUC
J
5 10ALPHA-L-FUCOPYRANOSE
lig 35
ZN
A
701 1ZINC ION
lig 36
ZN
A
702 1ZINC ION
lig 37
ZN
A
703 1ZINC ION
lig 38
SO4
A
722 5SULFATE ION
lig 39
SO4
A
723 5SULFATE ION
lig 40
SO4
A
724 5SULFATE ION
lig 41
SO4
A
725 5SULFATE ION
lig 42
SO4
A
726 5SULFATE ION
lig 43
SO4
A
727 5SULFATE ION
lig 44
SO4
A
728 5SULFATE ION
lig 45
SO4
A
729 5SULFATE ION
lig 46
SO4
A
730 5SULFATE ION
lig 47
SO4
A
731 5SULFATE ION
lig 48
ZN
B
701 1ZINC ION
lig 49
ZN
B
702 1ZINC ION
lig 50
ZN
B
703 1ZINC ION
lig 51
NAG
B
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
SO4
B
721 5SULFATE ION
lig 53
SO4
B
722 5SULFATE ION
lig 54
SO4
B
723 5SULFATE ION
lig 55
SO4
B
724 5SULFATE ION
lig 56
SO4
B
725 5SULFATE ION
lig 57
SO4
B
726 5SULFATE ION
lig 58
SO4
B
727 5SULFATE ION