Analysis of Ligand-Protein Contacts in PDB entry:
5FMB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 68 ligands in PDB entry 5FMB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
BMA
C
5 11BETA-D-MANNOPYRANOSE
lig 6
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 11
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
D
8 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
D
9 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
D
10 11ALPHA-D-MANNOPYRANOSE
lig 18
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 23
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 26
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 29
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
G
6 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
G
7 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
G
8 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
G
9 11ALPHA-D-MANNOPYRANOSE
lig 35
MAN
G
10 11ALPHA-D-MANNOPYRANOSE
lig 36
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
FRU
A
1666 12BETA-D-FRUCTOFURANOSE
lig 39
EPE
A
1667 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 40
NAG
A
1668 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
A
1686 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
A
1687 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
A
1688 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
A
1689 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
A
1690 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
A
1691 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
A
1692 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
A
1693 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
A
1694 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
A
1695 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
A
1696 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
A
1697 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
A
1700 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
A
1701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
FRU
B
1666 12BETA-D-FRUCTOFURANOSE
lig 56
EPE
B
1667 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 57
NAG
B
1668 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
NAG
B
1685 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
NAG
B
1686 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
B
1687 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
NAG
B
1688 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
NAG
B
1689 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
B
1690 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
NAG
B
1691 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
NAG
B
1692 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
NAG
B
1693 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
NAG
B
1694 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
B
1697 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE