Analysis of Ligand-Protein Contacts in PDB entry:
5G3L


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 5G3L. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ME0
D
69 9HYDROXY-L-METHIONINE
lig 2
ME0
E
69 9HYDROXY-L-METHIONINE
lig 3
ME0
H
69 9HYDROXY-L-METHIONINE
lig 4
GAL
A
1 12BETA-D-GALACTOPYRANOSE
lig 5
SIA
A
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 6
GAL
B
1 12BETA-D-GALACTOPYRANOSE
lig 7
SIA
B
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 8
GAL
C
1 12BETA-D-GALACTOPYRANOSE
lig 9
SIA
C
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
NA
D
100 1SODIUM ION
lig 11
NA
E
100 1SODIUM ION
lig 12
SIA
E
200 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 13
NA
G
100 1SODIUM ION
lig 14
SIA
G
300 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 15
NA
H
100 1SODIUM ION