Analysis of Ligand-Protein Contacts in PDB entry:
5GLS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 30 ligands in PDB entry 5GLS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
198 10PHOSPHOSERINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
A
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
A
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
A
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
CA
A
706 1CALCIUM ION
lig 8
HEM
A
707 43PROTOPORPHYRIN IX CONTAINING FE
lig 9
SCN
A
708 3THIOCYANATE ION
lig 10
IOD
A
709 1IODIDE ION
lig 11
IOD
A
710 1IODIDE ION
lig 12
IOD
A
711 1IODIDE ION
lig 13
IOD
A
712 1IODIDE ION
lig 14
IOD
A
713 1IODIDE ION
lig 15
IOD
A
714 1IODIDE ION
lig 16
IOD
A
715 1IODIDE ION
lig 17
IOD
A
716 1IODIDE ION
lig 18
IOD
A
717 1IODIDE ION
lig 19
IOD
A
718 1IODIDE ION
lig 20
IOD
A
719 1IODIDE ION
lig 21
IOD
A
720 1IODIDE ION
lig 22
IOD
A
721 1IODIDE ION
lig 23
IOD
A
722 1IODIDE ION
lig 24
IOD
A
723 1IODIDE ION
lig 25
IOD
A
724 1IODIDE ION
lig 26
IOD
A
725 1IODIDE ION
lig 27
IOD
A
726 1IODIDE ION
lig 28
OSM
A
727 41-(OXIDOSULFANYL)METHANAMINE
lig 29
OSM
A
728 41-(OXIDOSULFANYL)METHANAMINE
lig 30
GOL
A
729 6GLYCEROL