Analysis of Ligand-Protein Contacts in PDB entry:
5H2P


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 5H2P. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
RET
A
301 20RETINAL
lig 2
L2P
A
302 252,3-DI-PHYTANYL-GLYCEROL
lig 3
TRD
A
303 13TRIDECANE
lig 4
D10
A
304 10DECANE
lig 5
HP6
A
305 7HEPTANE
lig 6
OCT
A
306 8N-OCTANE
lig 7
OCT
A
307 8N-OCTANE
lig 8
MYS
A
308 15PENTADECANE
lig 9
UND
A
309 11UNDECANE
lig 10
L2P
A
310 222,3-DI-PHYTANYL-GLYCEROL
lig 11
L2P
A
311 462,3-DI-PHYTANYL-GLYCEROL
lig 12
MYS
A
312 15PENTADECANE
lig 13
DD9
A
313 9NONANE
lig 14
C14
A
314 14TETRADECANE
lig 15
OCT
A
315 8N-OCTANE
lig 16
UND
A
316 11UNDECANE