Analysis of Ligand-Protein Contacts in PDB entry:
5HRO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 5HRO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
OMC
E
6 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 2
OMC
E
8 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 3
OMC
F
6 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 4
OMC
F
8 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 5
GLC
G
1 11ALPHA-D-GLUCOPYRANOSE
lig 6
FRU
G
2 12BETA-D-FRUCTOFURANOSE
lig 7
GLC
H
1 11ALPHA-D-GLUCOPYRANOSE
lig 8
FRU
H
2 12BETA-D-FRUCTOFURANOSE
lig 9
MG
A
601 1MAGNESIUM ION
lig 10
MG
A
602 1MAGNESIUM ION
lig 11
3JY
A
603 23 OXOETHYL]PHOSPHONIC ACID
lig 12
MG
A
604 1MAGNESIUM ION
lig 13
SO4
A
605 5SULFATE ION
lig 14
SO4
B
501 5SULFATE ION
lig 15
SO4
B
502 5SULFATE ION
lig 16
SO4
B
503 5SULFATE ION
lig 17
SO4
B
504 5SULFATE ION
lig 18
MG
C
601 1MAGNESIUM ION
lig 19
MG
C
602 1MAGNESIUM ION
lig 20
MG
C
603 1MAGNESIUM ION
lig 21
SO4
C
604 5SULFATE ION
lig 22
3JY
F
101 23 OXOETHYL]PHOSPHONIC ACID