Analysis of Ligand-Protein Contacts in PDB entry:
5HRT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 37 ligands in PDB entry 5HRT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OMC
B
2007 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 2
OMG
B
2009 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 3
A2M
B
2014 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 4
OMG
B
2015 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 5
A2M
B
2019 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 6
OMC
B
2020 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 7
A2M
B
2032 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 8
OMG
B
2033 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 9
OMG
B
2034 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 10
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 20
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 21
ZN
A
912 1ZINC ION
lig 22
ZN
A
913 1ZINC ION
lig 23
CA
A
914 1CALCIUM ION
lig 24
NA
A
915 1SODIUM ION
lig 25
CL
A
916 1CHLORIDE ION
lig 26
K
A
917 1POTASSIUM ION
lig 27
GOL
A
918 6GLYCEROL
lig 28
GOL
A
919 6GLYCEROL
lig 29
GOL
A
920 6GLYCEROL
lig 30
GOL
A
921 6GLYCEROL
lig 31
GOL
A
922 6GLYCEROL
lig 32
GOL
A
923 6GLYCEROL
lig 33
GOL
A
924 6GLYCEROL
lig 34
GOL
A
925 6GLYCEROL
lig 35
GOL
A
926 6GLYCEROL
lig 36
GOL
A
927 6GLYCEROL
lig 37
CA
B
2101 1CALCIUM ION