Analysis of Ligand-Protein Contacts in PDB entry:
5IK5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 5IK5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
A2G
B
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 2
GAL
B
2 11BETA-D-GALACTOPYRANOSE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BDP
D
1 12BETA-D-GLUCOPYRANURONIC ACID
lig 6
XYS
D
2 9ALPHA-D-XYLOPYRANOSE
lig 7
BDP
D
3 12BETA-D-GLUCOPYRANURONIC ACID
lig 8
XYS
D
4 9ALPHA-D-XYLOPYRANOSE
lig 9
CA
A
4001 1CALCIUM ION
lig 10
CA
A
4002 1CALCIUM ION
lig 11
GOL
A
4007 6GLYCEROL
lig 12
GOL
A
4008 6GLYCEROL
lig 13
GOL
A
4009 6GLYCEROL
lig 14
GOL
A
4010 6GLYCEROL
lig 15
GOL
A
4011 6GLYCEROL
lig 16
GOL
A
4012 6GLYCEROL
lig 17
4MU
A
4013 137-HYDROXY-4-METHYL-2H-CHROMEN-2-ONE