Analysis of Ligand-Protein Contacts in PDB entry:
5IYP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 5IYP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GLA
C
1 12ALPHA-D-GALACTOPYRANOSE
lig 2
FUC
C
2 10ALPHA-L-FUCOPYRANOSE
lig 3
A2G
C
3 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 4
GLA
D
1 12ALPHA-D-GALACTOPYRANOSE
lig 5
FUC
D
2 10ALPHA-L-FUCOPYRANOSE
lig 6
A2G
D
3 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 7
EDO
A
601 41,2-ETHANEDIOL
lig 8
EDO
A
602 41,2-ETHANEDIOL
lig 9
EDO
A
603 41,2-ETHANEDIOL
lig 10
EDO
A
604 41,2-ETHANEDIOL
lig 11
EDO
A
605 41,2-ETHANEDIOL
lig 12
EDO
A
606 41,2-ETHANEDIOL
lig 13
FLC
B
601 13CITRATE ANION
lig 14
EDO
B
602 41,2-ETHANEDIOL