Analysis of Ligand-Protein Contacts in PDB entry:
5J50


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 5J50. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
A2G
I
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 2
GAL
I
2 11BETA-D-GALACTOPYRANOSE
lig 3
A2G
J
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 4
GAL
J
2 11BETA-D-GALACTOPYRANOSE
lig 5
A2G
K
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 6
GAL
K
2 11BETA-D-GALACTOPYRANOSE
lig 7
A2G
L
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 8
GAL
L
2 11BETA-D-GALACTOPYRANOSE
lig 9
EDO
A
201 41,2-ETHANEDIOL
lig 10
EDO
A
202 41,2-ETHANEDIOL
lig 11
EDO
A
203 41,2-ETHANEDIOL
lig 12
NPO
A
206 10P-NITROPHENOL
lig 13
NPO
C
203 10P-NITROPHENOL
lig 14
EDO
C
204 41,2-ETHANEDIOL
lig 15
EDO
C
205 41,2-ETHANEDIOL
lig 16
EDO
C
206 41,2-ETHANEDIOL
lig 17
EDO
C
207 41,2-ETHANEDIOL
lig 18
PEG
E
201 7DI(HYDROXYETHYL)ETHER
lig 19
EDO
E
202 41,2-ETHANEDIOL
lig 20
EDO
E
203 41,2-ETHANEDIOL
lig 21
NPO
E
206 10P-NITROPHENOL
lig 22
EDO
F
101 41,2-ETHANEDIOL
lig 23
EDO
G
201 41,2-ETHANEDIOL
lig 24
NPO
G
204 10P-NITROPHENOL
lig 25
EDO
H
101 41,2-ETHANEDIOL