Analysis of Ligand-Protein Contacts in PDB entry:
5JVA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5JVA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NRQ
A
64 23 YL}ACETIC ACID
lig 2
NRQ
B
64 23 YL}ACETIC ACID
lig 3
NRQ
C
64 23 YL}ACETIC ACID
lig 4
NRQ
D
64 23 YL}ACETIC ACID
lig 5
BME
A
301 4BETA-MERCAPTOETHANOL
lig 6
SO4
B
301 5SULFATE ION
lig 7
BME
B
302 4BETA-MERCAPTOETHANOL
lig 8
BME
C
301 4BETA-MERCAPTOETHANOL
lig 9
SO4
C
302 5SULFATE ION
lig 10
BME
D
301 4BETA-MERCAPTOETHANOL