Analysis of Ligand-Protein Contacts in PDB entry:
5K72


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 15 ligands in PDB entry 5K72. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
345 11PHOSPHOTHREONINE
lig 2
SEP
A
346 10PHOSPHOSERINE
lig 3
TPO
C
345 11PHOSPHOTHREONINE
lig 4
SEP
C
346 10PHOSPHOSERINE
lig 5
TPO
D
345 11PHOSPHOTHREONINE
lig 6
SEP
D
346 10PHOSPHOSERINE
lig 7
SO4
A
501 5SULFATE ION
lig 8
SO4
A
502 5SULFATE ION
lig 9
6QY
A
503 25 PYRROLO[2,3-D]PYRIMIDIN-4-YL]CYCLOHEXANE-
lig 10
SO4
B
501 5SULFATE ION
lig 11
SO4
B
502 5SULFATE ION
lig 12
SO4
B
503 5SULFATE ION
lig 13
6QY
B
504 25 PYRROLO[2,3-D]PYRIMIDIN-4-YL]CYCLOHEXANE-
lig 14
6QY
C
501 25 PYRROLO[2,3-D]PYRIMIDIN-4-YL]CYCLOHEXANE-
lig 15
6QY
D
501 25 PYRROLO[2,3-D]PYRIMIDIN-4-YL]CYCLOHEXANE-