Analysis of Ligand-Protein Contacts in PDB entry:
5LDU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 5LDU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 9
CU
A
501 1COPPER (II) ION
lig 10
CU
A
502 1COPPER (II) ION
lig 11
CU
A
503 1COPPER (II) ION
lig 12
CU
A
504 1COPPER (II) ION
lig 13
NAG
A
508 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
A
509 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
A
515 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
GOL
A
516 6GLYCEROL
lig 17
NA
A
517 1SODIUM ION
lig 18
NA
A
518 1SODIUM ION