Analysis of Ligand-Protein Contacts in PDB entry:
5M63


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 5M63. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GAL
A
1 11BETA-D-GALACTOPYRANOSE
lig 2
SIA
A
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 3
BGC
B
1 11BETA-D-GLUCOPYRANOSE
lig 4
GAL
B
2 11BETA-D-GALACTOPYRANOSE
lig 5
NAG
B
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
B
4 11BETA-D-GALACTOPYRANOSE
lig 7
SIA
B
5 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 8
BGC
B
6 11BETA-D-GLUCOPYRANOSE
lig 9
GAL
B
7 11BETA-D-GALACTOPYRANOSE
lig 10
GAL
C
1 11BETA-D-GALACTOPYRANOSE
lig 11
SIA
C
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 12
BGC
D
1 11BETA-D-GLUCOPYRANOSE
lig 13
GAL
D
2 11BETA-D-GALACTOPYRANOSE
lig 14
NAG
D
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
GAL
D
4 11BETA-D-GALACTOPYRANOSE
lig 16
SIA
D
5 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 17
BGC
D
6 11BETA-D-GLUCOPYRANOSE
lig 18
GAL
D
7 11BETA-D-GALACTOPYRANOSE
lig 19
EDO
H
301 41,2-ETHANEDIOL
lig 20
EDO
H
302 41,2-ETHANEDIOL
lig 21
EDO
H
303 41,2-ETHANEDIOL
lig 22
7GW
H
304 12 (HYDROXYMETHYL)OXOLANE-3,4-DIOL
lig 23
EDO
L
308 41,2-ETHANEDIOL
lig 24
EDO
L
309 41,2-ETHANEDIOL
lig 25
EDO
L
310 41,2-ETHANEDIOL
lig 26
EDO
L
311 41,2-ETHANEDIOL
lig 27
EDO
M
301 41,2-ETHANEDIOL
lig 28
7GW
M
302 12 (HYDROXYMETHYL)OXOLANE-3,4-DIOL
lig 29
EDO
M
305 41,2-ETHANEDIOL
lig 30
EDO
N
308 41,2-ETHANEDIOL
lig 31
EDO
N
309 41,2-ETHANEDIOL
lig 32
EDO
N
310 41,2-ETHANEDIOL
lig 33
EDO
N
311 41,2-ETHANEDIOL