Analysis of Ligand-Protein Contacts in PDB entry:
5MDJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 6 ligands in PDB entry 5MDJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NFV
L
701 9NI-FE OXIDIZED ACTIVE CENTER
lig 2
MG
L
702 1MAGNESIUM ION
lig 3
SF4
S
1001 8IRON/SULFUR CLUSTER
lig 4
F3S
S
1002 7FE3-S4 CLUSTER
lig 5
F4S
S
1003 7FE4-S3 CLUSTER
lig 6
CL
S
1004 1CHLORIDE ION