Analysis of Ligand-Protein Contacts in PDB entry:
5ODH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 53 ligands in PDB entry 5ODH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SF4
A
701 8IRON/SULFUR CLUSTER
lig 2
SF4
A
702 8IRON/SULFUR CLUSTER
lig 3
SF4
A
703 8IRON/SULFUR CLUSTER
lig 4
SF4
A
704 8IRON/SULFUR CLUSTER
lig 5
SF4
A
705 8IRON/SULFUR CLUSTER
lig 6
SF4
A
706 8IRON/SULFUR CLUSTER
lig 7
GOL
A
707 6GLYCEROL
lig 8
PE3
A
708 14 TRIDECAOXAHENTETRACONTANE-1,41-DIOL
lig 9
FAD
A
709 53FLAVIN-ADENINE DINUCLEOTIDE
lig 10
9S8
B
301 8NON-CUBANE [4FE-4S]-CLUSTER
lig 11
9S8
B
302 8NON-CUBANE [4FE-4S]-CLUSTER
lig 12
COM
B
303 71-THIOETHANESULFONIC ACID
lig 13
GOL
B
304 6GLYCEROL
lig 14
GOL
B
305 6GLYCEROL
lig 15
SF4
C
201 8IRON/SULFUR CLUSTER
lig 16
SF4
C
202 8IRON/SULFUR CLUSTER
lig 17
FES
D
201 4FE2/S2 (INORGANIC) CLUSTER
lig 18
TRS
D
202 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 19
SF4
E
301 8IRON/SULFUR CLUSTER
lig 20
SF4
E
302 8IRON/SULFUR CLUSTER
lig 21
SF4
E
303 8IRON/SULFUR CLUSTER
lig 22
GOL
E
304 6GLYCEROL
lig 23
PE3
F
501 9 TRIDECAOXAHENTETRACONTANE-1,41-DIOL
lig 24
PE3
F
502 9 TRIDECAOXAHENTETRACONTANE-1,41-DIOL
lig 25
FE
F
504 1FE (III) ION
lig 26
FCO
F
505 7CARBONMONOXIDE-(DICYANO) IRON
lig 27
NI
F
506 1NICKEL (II) ION
lig 28
SF4
G
701 8IRON/SULFUR CLUSTER
lig 29
SF4
G
702 8IRON/SULFUR CLUSTER
lig 30
SF4
G
703 8IRON/SULFUR CLUSTER
lig 31
SF4
G
704 8IRON/SULFUR CLUSTER
lig 32
SF4
G
705 8IRON/SULFUR CLUSTER
lig 33
SF4
G
706 8IRON/SULFUR CLUSTER
lig 34
GOL
G
707 6GLYCEROL
lig 35
FE
G
708 1FE (III) ION
lig 36
ACT
G
709 4ACETATE ION
lig 37
ACT
G
710 4ACETATE ION
lig 38
FAD
G
711 53FLAVIN-ADENINE DINUCLEOTIDE
lig 39
9S8
H
301 8NON-CUBANE [4FE-4S]-CLUSTER
lig 40
9S8
H
302 8NON-CUBANE [4FE-4S]-CLUSTER
lig 41
COM
H
303 71-THIOETHANESULFONIC ACID
lig 42
TP7
H
304 21COENZYME B
lig 43
SF4
I
201 8IRON/SULFUR CLUSTER
lig 44
SF4
I
202 8IRON/SULFUR CLUSTER
lig 45
FES
J
201 4FE2/S2 (INORGANIC) CLUSTER
lig 46
SF4
K
301 8IRON/SULFUR CLUSTER
lig 47
SF4
K
302 8IRON/SULFUR CLUSTER
lig 48
SF4
K
303 8IRON/SULFUR CLUSTER
lig 49
GOL
K
304 6GLYCEROL
lig 50
PE3
L
501 9 TRIDECAOXAHENTETRACONTANE-1,41-DIOL
lig 51
FE
L
503 1FE (III) ION
lig 52
FCO
L
504 7CARBONMONOXIDE-(DICYANO) IRON
lig 53
NI
L
505 1NICKEL (II) ION