Analysis of Ligand-Protein Contacts in PDB entry:
5ODU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 5ODU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
AMG
A
201 13METHYL ALPHA-D-GALACTOPYRANOSIDE
lig 2
CA
A
202 1CALCIUM ION
lig 3
AMG
B
201 13METHYL ALPHA-D-GALACTOPYRANOSIDE
lig 4
CA
B
202 1CALCIUM ION
lig 5
AMG
C
201 13METHYL ALPHA-D-GALACTOPYRANOSIDE
lig 6
CA
C
202 1CALCIUM ION
lig 7
AMG
D
201 13METHYL ALPHA-D-GALACTOPYRANOSIDE
lig 8
CA
D
202 1CALCIUM ION
lig 9
AMG
E
201 13METHYL ALPHA-D-GALACTOPYRANOSIDE
lig 10
CA
E
202 1CALCIUM ION
lig 11
AMG
F
201 13METHYL ALPHA-D-GALACTOPYRANOSIDE
lig 12
CA
F
202 1CALCIUM ION
lig 13
AMG
G
201 13METHYL ALPHA-D-GALACTOPYRANOSIDE
lig 14
CA
G
202 1CALCIUM ION
lig 15
AMG
H
201 13METHYL ALPHA-D-GALACTOPYRANOSIDE
lig 16
CA
H
202 1CALCIUM ION