Analysis of Ligand-Protein Contacts in PDB entry:
5OPQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 5OPQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MPD
A
701 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 2
MPD
A
702 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 3
TRS
A
703 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 4
CL
A
704 1CHLORIDE ION
lig 5
MPD
B
701 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
TRS
B
702 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 7
CL
B
703 1CHLORIDE ION
lig 8
MPD
C
701 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 9
TRS
C
702 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 10
TRS
C
703 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 11
CL
C
704 1CHLORIDE ION
lig 12
MPD
D
701 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 13
TRS
D
702 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 14
CL
D
703 1CHLORIDE ION