Analysis of Ligand-Protein Contacts in PDB entry:
5OYA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 5OYA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HYP
A
48 84-HYDROXYPROLINE
lig 2
CSO
A
109 7S-HYDROXYCYSTEINE
lig 3
LOH
A
150 113,4-DIHYDROXYLYSINE
lig 4
HYP
A
155 84-HYDROXYPROLINE
lig 5
HL2
A
174 9(2S,3R)-2-AMINO-3-HYDROXY-4-METHYLPENTANOI
lig 6
KCX
A
205 12LYSINE NZ-CARBOXYLIC ACID
lig 7
M3L
A
346 12N-TRIMETHYLLYSINE
lig 8
SNC
A
457 8S-NITROSO-CYSTEINE
lig 9
HYP
B
48 84-HYDROXYPROLINE
lig 10
CSO
B
109 7S-HYDROXYCYSTEINE
lig 11
LOH
B
150 113,4-DIHYDROXYLYSINE
lig 12
HYP
B
155 84-HYDROXYPROLINE
lig 13
HL2
B
174 9(2S,3R)-2-AMINO-3-HYDROXY-4-METHYLPENTANOI
lig 14
KCX
B
205 12LYSINE NZ-CARBOXYLIC ACID
lig 15
M3L
B
346 12N-TRIMETHYLLYSINE
lig 16
SNC
B
457 8S-NITROSO-CYSTEINE
lig 17
CSO
C
109 7S-HYDROXYCYSTEINE
lig 18
LOH
C
150 113,4-DIHYDROXYLYSINE
lig 19
HYP
C
155 84-HYDROXYPROLINE
lig 20
HL2
C
174 9(2S,3R)-2-AMINO-3-HYDROXY-4-METHYLPENTANOI
lig 21
KCX
C
205 12LYSINE NZ-CARBOXYLIC ACID
lig 22
M3L
C
346 12N-TRIMETHYLLYSINE