Analysis of Ligand-Protein Contacts in PDB entry:
5S8B


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 31 ligands in PDB entry 5S8B. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
LU8
A
501 32 TRIMETHOXYPHENYL)PYRIDINE
lig 2
EDO
A
502 41,2-ETHANEDIOL
lig 3
EDO
A
503 41,2-ETHANEDIOL
lig 4
EDO
A
504 41,2-ETHANEDIOL
lig 5
EDO
A
505 41,2-ETHANEDIOL
lig 6
DMS
A
506 4DIMETHYL SULFOXIDE
lig 7
LU8
A
507 32 TRIMETHOXYPHENYL)PYRIDINE
lig 8
LU8
A
508 32 TRIMETHOXYPHENYL)PYRIDINE
lig 9
XFV
A
509 61LAMBDA~6~-THIETANE-1,1-DIONE
lig 10
XFV
A
510 61LAMBDA~6~-THIETANE-1,1-DIONE
lig 11
XFV
A
511 61LAMBDA~6~-THIETANE-1,1-DIONE
lig 12
XFV
A
512 61LAMBDA~6~-THIETANE-1,1-DIONE
lig 13
SO4
A
513 5SULFATE ION
lig 14
SO4
A
514 5SULFATE ION
lig 15
SO4
A
515 5SULFATE ION
lig 16
EDO
A
516 41,2-ETHANEDIOL
lig 17
EDO
A
517 41,2-ETHANEDIOL
lig 18
EDO
A
518 41,2-ETHANEDIOL
lig 19
EDO
A
519 41,2-ETHANEDIOL
lig 20
LU8
B
501 32 TRIMETHOXYPHENYL)PYRIDINE
lig 21
SO4
B
502 5SULFATE ION
lig 22
EDO
B
503 41,2-ETHANEDIOL
lig 23
DMS
B
504 4DIMETHYL SULFOXIDE
lig 24
XFV
B
505 61LAMBDA~6~-THIETANE-1,1-DIONE
lig 25
XFV
B
506 61LAMBDA~6~-THIETANE-1,1-DIONE
lig 26
XFV
B
507 61LAMBDA~6~-THIETANE-1,1-DIONE
lig 27
SO4
B
508 5SULFATE ION
lig 28
SO4
B
509 5SULFATE ION
lig 29
EDO
B
510 41,2-ETHANEDIOL
lig 30
EDO
B
511 41,2-ETHANEDIOL
lig 31
EDO
B
512 41,2-ETHANEDIOL