Analysis of Ligand-Protein Contacts in PDB entry:
5SKD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 5SKD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CME
A
509 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 2
CME
B
509 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 3
CME
C
509 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 4
CME
D
509 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 5
ZN
A
801 1ZINC ION
lig 6
MG
A
802 1MAGNESIUM ION
lig 7
KER
A
803 31 (TRIFLUOROMETHOXY)PHENYL]PYRIDAZIN-4(1H)-
lig 8
ZN
B
801 1ZINC ION
lig 9
MG
B
802 1MAGNESIUM ION
lig 10
PR
B
803 1PRASEODYMIUM ION
lig 11
PR
B
804 1PRASEODYMIUM ION
lig 12
PR
B
805 1PRASEODYMIUM ION
lig 13
PR
B
806 1PRASEODYMIUM ION
lig 14
PR
B
807 1PRASEODYMIUM ION
lig 15
GOL
B
808 6GLYCEROL
lig 16
KER
B
809 31 (TRIFLUOROMETHOXY)PHENYL]PYRIDAZIN-4(1H)-
lig 17
ZN
C
801 1ZINC ION
lig 18
MG
C
802 1MAGNESIUM ION
lig 19
PR
C
803 1PRASEODYMIUM ION
lig 20
PR
C
804 1PRASEODYMIUM ION
lig 21
PR
C
805 1PRASEODYMIUM ION
lig 22
KER
C
806 31 (TRIFLUOROMETHOXY)PHENYL]PYRIDAZIN-4(1H)-
lig 23
ZN
D
801 1ZINC ION
lig 24
MG
D
802 1MAGNESIUM ION
lig 25
KER
D
803 31 (TRIFLUOROMETHOXY)PHENYL]PYRIDAZIN-4(1H)-