Analysis of Ligand-Protein Contacts in PDB entry:
5TIQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 56 ligands in PDB entry 5TIQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BGC
C
1 11BETA-D-GLUCOPYRANOSE
lig 2
FUC
C
2 10ALPHA-L-FUCOPYRANOSE
lig 3
XYP
C
3 9BETA-D-XYLOPYRANOSE
lig 4
RM4
C
4 10BETA-L-RHAMNOPYRANOSE
lig 5
7CV
C
5 126-DEOXY-2,3-DI-O-METHYL-ALPHA-L-MANNOPYRAN
lig 6
XXR
C
6 10ALPHA-D-RHAMNOPYRANOSE
lig 7
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 8
GLA
C
8 11ALPHA-D-GALACTOPYRANOSE
lig 9
XYP
C
9 9BETA-D-XYLOPYRANOSE
lig 10
BGC
D
1 11BETA-D-GLUCOPYRANOSE
lig 11
FUC
D
2 10ALPHA-L-FUCOPYRANOSE
lig 12
XYP
D
3 9BETA-D-XYLOPYRANOSE
lig 13
RM4
D
4 10BETA-L-RHAMNOPYRANOSE
lig 14
7CV
D
5 126-DEOXY-2,3-DI-O-METHYL-ALPHA-L-MANNOPYRAN
lig 15
XXR
D
6 10ALPHA-D-RHAMNOPYRANOSE
lig 16
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 17
GLA
D
8 11ALPHA-D-GALACTOPYRANOSE
lig 18
XYP
D
9 9BETA-D-XYLOPYRANOSE
lig 19
BGC
E
1 11BETA-D-GLUCOPYRANOSE
lig 20
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 21
XXR
E
3 10ALPHA-D-RHAMNOPYRANOSE
lig 22
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 23
GLA
E
5 11ALPHA-D-GALACTOPYRANOSE
lig 24
XYP
E
6 9BETA-D-XYLOPYRANOSE
lig 25
XYP
E
7 9BETA-D-XYLOPYRANOSE
lig 26
BGC
F
1 11BETA-D-GLUCOPYRANOSE
lig 27
FUC
F
2 10ALPHA-L-FUCOPYRANOSE
lig 28
BGC
G
1 11BETA-D-GLUCOPYRANOSE
lig 29
FUC
G
2 10ALPHA-L-FUCOPYRANOSE
lig 30
XYP
G
3 9BETA-D-XYLOPYRANOSE
lig 31
RM4
G
4 10BETA-L-RHAMNOPYRANOSE
lig 32
7CV
G
5 126-DEOXY-2,3-DI-O-METHYL-ALPHA-L-MANNOPYRAN
lig 33
XXR
G
6 10ALPHA-D-RHAMNOPYRANOSE
lig 34
MAN
G
7 11ALPHA-D-MANNOPYRANOSE
lig 35
GLA
G
8 11ALPHA-D-GALACTOPYRANOSE
lig 36
XYP
G
9 9BETA-D-XYLOPYRANOSE
lig 37
BGC
H
1 11BETA-D-GLUCOPYRANOSE
lig 38
FUC
H
2 10ALPHA-L-FUCOPYRANOSE
lig 39
XYP
H
3 9BETA-D-XYLOPYRANOSE
lig 40
RM4
H
4 10BETA-L-RHAMNOPYRANOSE
lig 41
7CV
H
5 126-DEOXY-2,3-DI-O-METHYL-ALPHA-L-MANNOPYRAN
lig 42
XXR
H
6 10ALPHA-D-RHAMNOPYRANOSE
lig 43
MAN
H
7 11ALPHA-D-MANNOPYRANOSE
lig 44
GLA
H
8 11ALPHA-D-GALACTOPYRANOSE
lig 45
XYP
H
9 9BETA-D-XYLOPYRANOSE
lig 46
BGC
I
1 11BETA-D-GLUCOPYRANOSE
lig 47
FUC
I
2 10ALPHA-L-FUCOPYRANOSE
lig 48
XYP
I
3 9BETA-D-XYLOPYRANOSE
lig 49
RM4
I
4 10BETA-L-RHAMNOPYRANOSE
lig 50
7CV
I
5 126-DEOXY-2,3-DI-O-METHYL-ALPHA-L-MANNOPYRAN
lig 51
XXR
I
6 10ALPHA-D-RHAMNOPYRANOSE
lig 52
MAN
I
7 11ALPHA-D-MANNOPYRANOSE
lig 53
GLA
I
8 11ALPHA-D-GALACTOPYRANOSE
lig 54
XYP
I
9 9BETA-D-XYLOPYRANOSE
lig 55
BGC
J
1 11BETA-D-GLUCOPYRANOSE
lig 56
FUC
J
2 10ALPHA-L-FUCOPYRANOSE