Analysis of Ligand-Protein Contacts in PDB entry:
5TRA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 5TRA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
4AC
A
12 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 2
H2U
A
16 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 3
OMG
A
17 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 4
H2U
A
19 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 5
H2U
A
20 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 6
M2G
A
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 7
PSU
A
32 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 8
6IA
A
37 22N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE
lig 9
PSU
A
39 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 10
OMU
A
44 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 11
5MC
A
48 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 12
5MU
A
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 13
PSU
A
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE