Analysis of Ligand-Protein Contacts in PDB entry:
5VCS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 5VCS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
BMA
C
2 11BETA-D-MANNOPYRANOSE
lig 3
MAN
C
3 11ALPHA-D-MANNOPYRANOSE
lig 4
NAG
C
4 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
D
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
D
2 11BETA-D-MANNOPYRANOSE
lig 8
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 9
NAG
D
4 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
A
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
DMS
A
502 4DIMETHYL SULFOXIDE
lig 13
DMS
A
503 4DIMETHYL SULFOXIDE
lig 14
DMS
A
504 4DIMETHYL SULFOXIDE
lig 15
NAG
B
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
PEG
B
502 7DI(HYDROXYETHYL)ETHER