Analysis of Ligand-Protein Contacts in PDB entry:
5VGM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 5VGM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
KCX
A
98 12LYSINE NZ-CARBOXYLIC ACID
lig 2
CSX
A
259 7S-OXY CYSTEINE
lig 3
CSX
A
261 7S-OXY CYSTEINE
lig 4
KCX
B
98 12LYSINE NZ-CARBOXYLIC ACID
lig 5
CSX
B
259 7S-OXY CYSTEINE
lig 6
CSX
B
261 7S-OXY CYSTEINE
lig 7
ZN
A
401 1ZINC ION
lig 8
ZN
A
402 1ZINC ION
lig 9
ACT
A
403 4ACETATE ION
lig 10
ACT
A
404 4ACETATE ION
lig 11
ACT
A
405 4ACETATE ION
lig 12
ZN
B
401 1ZINC ION
lig 13
ZN
B
402 1ZINC ION
lig 14
ACT
B
403 4ACETATE ION
lig 15
CL
B
404 1CHLORIDE ION