Analysis of Ligand-Protein Contacts in PDB entry:
5VK0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 5VK0. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
B
0 3ACETYL GROUP
lig 2
9E7
B
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 3
NH2
B
13 1AMINO GROUP
lig 4
ACE
D
0 3ACETYL GROUP
lig 5
9E7
D
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 6
NH2
D
13 1AMINO GROUP
lig 7
ACE
F
0 3ACETYL GROUP
lig 8
9E7
F
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 9
NH2
F
13 1AMINO GROUP
lig 10
ACE
H
0 3ACETYL GROUP
lig 11
9E7
H
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 12
NH2
H
13 1AMINO GROUP
lig 13
ACE
J
0 3ACETYL GROUP
lig 14
9E7
J
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 15
NH2
J
13 1AMINO GROUP
lig 16
ACE
L
0 3ACETYL GROUP
lig 17
9E7
L
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 18
NH2
L
13 1AMINO GROUP
lig 19
ACE
N
0 3ACETYL GROUP
lig 20
9E7
N
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 21
NH2
N
13 1AMINO GROUP
lig 22
ACE
P
0 3ACETYL GROUP
lig 23
9E7
P
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 24
NH2
P
13 1AMINO GROUP
lig 25
ACE
R
0 3ACETYL GROUP
lig 26
9E7
R
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 27
NH2
R
13 1AMINO GROUP
lig 28
ACE
T
0 3ACETYL GROUP
lig 29
9E7
T
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 30
NH2
T
13 1AMINO GROUP
lig 31
ACE
V
0 3ACETYL GROUP
lig 32
9E7
V
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 33
NH2
V
13 1AMINO GROUP
lig 34
ACE
X
0 3ACETYL GROUP
lig 35
9E7
X
8 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 36
NH2
X
13 1AMINO GROUP
lig 37
CL
C
201 1CHLORIDE ION
lig 38
CL
X
101 1CHLORIDE ION